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Report for CCDS1469.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
1469.1 |
Public |
Homo sapiens |
1 |
IL19 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:29949](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:1469.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:29949](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 1469.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000270218.10 |
ENSP00000270218.6 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000270218.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000270218.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000270218](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000270218](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000340758.7 |
ENSP00000343000.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000340758.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000343000.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000340758](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000343000](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000659997.3 |
ENSP00000499459.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000659997.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000499459.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000659997](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000499459](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000656872.2 |
ENSP00000499487.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000656872.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000499487.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000656872](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000499487](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369605.1 |
NP_001356534.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369605.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356534.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369605](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356534](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356534.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001393490.1 |
NP_001380419.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001393490.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001380419.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001393490](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001380419](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001380419.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001393491.1 |
NP_001380420.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001393491.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001380420.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001393491](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001380420](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001380420.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_013371.5 |
NP_037503.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_013371.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_037503.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_013371](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_037503](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_037503.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_153758.5 |
NP_715639.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_153758.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_715639.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_153758](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_715639](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_715639.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 1469.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (534 nt): ATGAAGTTACAGTGTGTTTCCCTTTGGCTCCTGGGTACAATACTGATATTGTGCTCAGTAGACAACCACG GTCTCAGGAGATGTCTGATTTCCACAGACATGCACCATATAGAAGAGAGTTTCCAAGAAATCAAAAGAGC CATCCAAGCTAAGGACACCTTCCCAAATGTCACTATCCTGTCCACATTGGAGACTCTGCAGATCATTAAG CCCTTAGATGTGTGCTGCGTGACCAAGAACCTCCTGGCGTTCTACGTGGACAGGGTGTTCAAGGATCATC AGGAGCCAAACCCCAAAATCTTGAGAAAAATCAGCAGCATTGCCAACTCTTTCCTCTACATGCAGAAAAC TCTGCGGCAATGTCAGGAACAGAGGCAGTGTCACTGCAGGCAGGAAGCCACCAATGCCACCAGAGTCATC CATGACAACTATGATCAGCTGGAGGTCCACGCTGCTGCCATTAAATCCCTGGGAGAGCTCGACGTCTTTC TAGCCTGGATTAATAAGAATCATGAAGTAATGTTCTCAGCTTGA
Translation (177 aa): MKLQCVSLWLLGTILILCSVDNHGLRRCLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIK PLDVCCVTKNLLAFYVDRVFKDHQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVI HDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
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