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Report for CCDS14755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14755.1 Public Homo sapiens X SLC10A3 24 110 108 CCDS HistoryNCBI Gene:8273Re-query CCDS DB by CCDS ID:14755.1Re-query CCDS DB by GeneID:8273See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14755.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263512.5 ENSP00000263512.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000263512.5Link to Ensembl Protein Viewer:ENSP00000263512.4Re-query CCDS DB by Nucleotide ID:ENST00000263512Re-query CCDS DB by Protein ID:ENSP00000263512
Original member Current member EBI ENST00000393587.4 ENSP00000377212.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393587.4Link to Ensembl Protein Viewer:ENSP00000377212.4Re-query CCDS DB by Nucleotide ID:ENST00000393587Re-query CCDS DB by Protein ID:ENSP00000377212
Original member Current member EBI ENST00000651600.1 ENSP00000499188.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000651600.1Link to Ensembl Protein Viewer:ENSP00000499188.1Re-query CCDS DB by Nucleotide ID:ENST00000651600Re-query CCDS DB by Protein ID:ENSP00000499188
Original member Current member NCBI NM_001142392.3 NP_001135864.1 Accepted alive Link to Nucleotide Sequence:NM_001142392.3Link to Protein Sequence:NP_001135864.1Re-query CCDS DB by Nucleotide ID:NM_001142392Re-query CCDS DB by Protein ID:NP_001135864Link to BLAST:NP_001135864.1
Original member Current member NCBI NM_019848.5 NP_062822.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019848.5Link to Protein Sequence:NP_062822.1Re-query CCDS DB by Nucleotide ID:NM_019848Re-query CCDS DB by Protein ID:NP_062822Link to BLAST:NP_062822.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135864.1 477 P09131-1 477 100% 0 0
NP_062822.1 477 P09131-1 477 100% 0 0

Chromosomal Locations for CCDS 14755.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 154487507 154488940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1434 nt):
ATGGTGTTAATGCAGGACAAGGGCAGCTCTCAGCAGTGGCCTGGTCTGGGGGGCGAGGGTGGTGGCACAG
GTCCCTTAAGCATGCTCAGAGCTGCCCTGCTGCTCATCAGCCTGCCATGGGGGGCCCAAGGGACAGCCAG
CACCAGCCTCAGCACTGCTGGGGGTCACACCGTGCCACCGACTGGGGGCCGCTACTTGAGCATTGGAGAT
GGCTCTGTGATGGAGTTTGAGTTTCCTGAGGACAGTGAGGGCATCATCGTGATCTCCAGCCAGTACCCAG
GCCAGGCCAACAGGACGGCGCCTGGCCCCATGCTCAGGGTCACCTCCCTGGACACAGAGGTGCTGACCAT
CAAGAACGTGAGTGCTATAACCTGGGGAGGCGGGGGTGGCTTTGTGGTGAGCATCCACTCAGGCCTGGCT
GGGCTGGCCCCACTCCACATCCAGCTCGTGGACGCCCATGAGGCCCCGCCCACACTGATTGAGGAGCGGA
GAGACTTCTGCATCAAGGTCTCACCTGCTGAAGACACGCCTGCCACCCTCAGCGCCGACCTGGCCCACTT
CTCGGAAAACCCAATCCTCTACCTGCTCCTGCCTCTTATCTTTGTCAACAAGTGTTCGTTTGGGTGCAAA
GTGGAACTCGAGGTTCTGAAGGGGCTCATGCAGAGCCCCCAGCCCATGCTGCTGGGCCTCCTGGGCCAGT
TTCTGGTCATGCCCTTGTACGCTTTCCTCATGGCCAAGGTCTTCATGCTGCCCAAGGCCCTGGCTCTGGG
CCTCATCATCACCTGCTCGTCGCCTGGCGGCGGGGGGAGCTACCTCTTCAGCCTCCTTCTTGGAGGGGAC
GTCACCCTGGCCATCTCCATGACTTTCCTCTCTACGGTGGCTGCCACTGGCTTCTTGCCTCTGTCTTCGG
CCATCTACAGCCGCCTGCTCAGCATCCATGAGACGCTCCACGTGCCCATCTCCAAGATCCTGGGGACCCT
GCTGTTCATTGCCATCCCCATAGCCGTGGGCGTGCTGATCAAGTCCAAGCTCCCCAAGTTCTCCCAGCTG
CTGCTGCAGGTCGTCAAGCCCTTCAGCTTTGTGCTCCTCCTGGGCGGCCTCTTCCTGGCCTATCGCATGG
GGGTCTTCATCCTGGCAGGCATCCGGCTACCCATCGTACTGGTGGGTATCACGGTGCCCCTGGTTGGCCT
GTTGGTGGGCTACTGCCTAGCCACGTGTCTGAAGCTGCCAGTGGCCCAGCGGCGGACGGTCAGCATTGAG
GTAGGGGTGCAGAACAGCCTGCTGGCCTTGGCCATGCTGCAGCTATCCCTCCGCCGCCTTCAAGCTGACT
ATGCCTCCCAGGCCCCCTTCATTGTGGCGCTGAGCGGCACCTCCGAGATGCTGGCCTTGGTCATTGGCCA
CTTCATCTACAGCAGCCTGTTCCCAGTTCCCTGA

Translation (477 aa):
MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPPTGGRYLSIGD
GSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNVSAITWGGGGGFVVSIHSGLA
GLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFVNKCSFGCK
VELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGD
VTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQL
LLQVVKPFSFVLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIE
VGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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