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Report for CCDS14959.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14959.1 Public Mus musculus 1 Coq10b 23 108 98 CCDS HistoryNCBI Gene:67876Re-query CCDS DB by CCDS ID:14959.1Re-query CCDS DB by GeneID:67876See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14959.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087617.10 ENSMUSP00000084899.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087617.10Link to Ensembl Protein Viewer:ENSMUSP00000084899.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000087617Re-query CCDS DB by Protein ID:ENSMUSP00000084899
Original member Current member NCBI NM_026424.3 NP_080700.3 Accepted alive Link to Nucleotide Sequence:NM_026424.3Link to Protein Sequence:NP_080700.3Re-query CCDS DB by Nucleotide ID:NM_026424Re-query CCDS DB by Protein ID:NP_080700Link to BLAST:NP_080700.3

Chromosomal Locations for CCDS 14959.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 55052875 55052990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55064181 55064373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55067497 55067598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55071636 55071803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGATCATGGCAGCTCGGACCAGTCAGAGGGCCCTGGCGAGGGTGGCATCGGGGTGCCATCCGAAGTCGA
CCACCGTGACGGAAGCCCCGGCGCGGGGGTCTGCGCGCGACGTCAGGTACTCAATGCAAGAAATGTATGA
CGTAGTATCAGGAATGGAGGACTATCAGCATTTCGTTCCCTGGTGTAAAAAGTCAGATATAATATCAAGG
CGATCTGGATACTGTAAAACCAGATTAGAAGTTGGGTTCCCCCCCGTTCTGGAGAGATACACATCAATAG
TAACCTTGGTAAAACCGCACTTGGTAAAGGCATCTTGTACTGATGGGAAACTTTTCAATCATTTGGAGAC
TATTTGGCGTTTTAGCCCAGGTCTTCCTGGCTATCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTT
GAATTCCGCTCCCTTCTGCACTCTCAGCTCGCTACTCTGTTCTTCGATGAAGTTGTGAAACAAATGGTAG
CAGCCTTTGAAAGAAGAGCCTGTAAACTGTATGGTCCAGAGACAAACATACCTCGGGAATTAATGCTTCA
TGAAATTCACCACACCTAA

Translation (192 aa):
MIMAARTSQRALARVASGCHPKSTTVTEAPARGSARDVRYSMQEMYDVVSGMEDYQHFVPWCKKSDIISR
RSGYCKTRLEVGFPPVLERYTSIVTLVKPHLVKASCTDGKLFNHLETIWRFSPGLPGYPRTCTLDFSISF
EFRSLLHSQLATLFFDEVVKQMVAAFERRACKLYGPETNIPRELMLHEIHHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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