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Report for CCDS15727.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15727.1 Public Mus musculus 2 Mastl 23 108 98 CCDS HistoryNCBI Gene:67121Re-query CCDS DB by CCDS ID:15727.1Re-query CCDS DB by GeneID:67121See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15727.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028119.6 ENSMUSP00000028119.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028119.6Link to Ensembl Protein Viewer:ENSMUSP00000028119.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000028119Re-query CCDS DB by Protein ID:ENSMUSP00000028119
Original member Current member NCBI NM_025979.4 NP_080255.3 Accepted alive Link to Nucleotide Sequence:NM_025979.4Link to Protein Sequence:NP_080255.3Re-query CCDS DB by Nucleotide ID:NM_025979Re-query CCDS DB by Protein ID:NP_080255Link to BLAST:NP_080255.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080255.3 865 Q8C0P0-1 865 100% 0 0

Chromosomal Locations for CCDS 15727.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 23118435 23118592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23120457 23120558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23120893 23121006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23131680 23131818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23132625 23133731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23136871 23137043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23139908 23140055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23140499 23140605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23145364 23145452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23146042 23146181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23150988 23151125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 23155679 23155861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2598 nt):
ATGGAGTCCGCCTCGGCAAGTGAGGAGAATGAAGGAGGTGCGGCGATAGAGGAGTGCGTGAGTAGGATCC
CGGTACCAAGACCACCCTCCATTGAGGAGTTCACCATAGTGAAGCCCATTAGCCGTGGTGCATTCGGGAA
AGTGTACCTGGGACAGAAAGGCGGCAAGTTGTACGCAGTGAAGGTTGTCAAAAAGGCAGACATGATCAAT
AAAAATATGACTCATCAGGTACAAGCTGAGAGAGATGCCCTGGCACTGAGCAAAAGCCCTTTTGTTGTGC
ATCTCTATTACTCACTGCAGTCAGCAAGCAACATCTACTTGATAATGGAGTATCTTATTGGTGGAGATGT
CAAGTCTCTCCTACATATATATGGTTATTTTGATGAAGAGATGGCTATAAAATATATTTCTGAAGTAGCA
TTGGCTTTAGACTACCTGCACAGACATGGAATCATCCATAGGGATTTGAAACCGGACAATATGCTTATTT
CCAATGAGGGTCATATTAAACTGACAGATTTTGGCCTTTCCAAAGTTACTTTGAATAGAGACATCAATAT
GATGGATATTCTCACAACACCATCAATGTCTAAACCTAAGCAAGATTATTCAAGAACTCCAGGACAAGTC
TTATCTCTCATCAGTTCTTTGGGATTTTTCACACCAGTTGGAGAAAAAGATCAAGACTCTGCAAACATGT
TTTCAGCCCCTAAGTCTGCTGCACAACTTTCTCGAGGATTCATTTGTCCTATGTCTGTAGATCAGAAGGA
GCCGACTTCTTATTCGAGCAAACTGCTAAAATCATGTTTTGAAACCCTTTCATCCAATCCAGAAATACCT
GTGAAATGTCTGACTTCTAATCTACTCCAGTGTAGGAAAAGACTGGGTACCTCAAGTACTAGTAGCCAGT
CTCATACCTTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAG
TACCGAATCATCAGGCTGTGCAATGAGCTGGAATGCAGTTGAAATGCTGTATGCAAAATCTACAAGTGCC
ATCAAGACAAAAACAGAACTGGAATTAGCACTTTCTCCCATTCATGACAGCAGTGCCATTCCTGCTGCTG
GAAGCAACCAGGTGACCCTCCCTAGAAAATGCTTCAGGGAAATCTCTTGGGAAGCAAGGGACCCAGATAA
TGAGAACATGACCATTGACAAGGGACAGTCTGGTTTCTGTCAGTCCAGTCAGAGGTCTGTAAATTCTAGT
GCTACATCTGAAGAACACCTTGGTAAAAGAAATTATAAAAGAAATTTCCACTTGGTTGACTCCAGTCCTT
GTCAGGAAATTATGCAAAGTAAAAAAAACTGTACAGAGTATGAGGCCAATAAGGAAAGGCAAGGCTGCCG
TGCAAATCAAAGTACAGGCTTGACAACCGAAGTCCAGAACCTGAAGCTATCAGGGTGTGAAAGTCAGCAA
CTTGACTATGCCAATAAGGAGAACATTGTCACCTATTTAACTGACAGACAAACCCCAGAAAAACTGCATA
TACCAACGATAGCAAAGAACCTTATGTCTGAACTAGATGAAGACTGTGAGCTGAGCAGTAAAAAGGACTG
CCTCAGTTCTAATTCTGTATGTTCTGATGAGGATAGAGCTCTTAAAACTACCTGTGTGGATTCGGATTCA
TCTTTTCCTGGAGTGTCTATGATGGAGAGTTCACTGGAAATTCAGGCCTTAGAACCAGATAAAAGCATCA
GAGACTACTCTTTTGAAGAACCAAACACTGAAGATCTATTTGTGTTACCAAAATGCCAAGAAAATTCCTT
GCCACAAGATGACTGCCATGCTTGTATCCAAGACAGTAGCCAAGTGTCAGCTCATCCCTCAAAGGCGCCC
AAAGCATTGACCTCTAAAATCAACGTCGTGGCTTTTCGAAGTTTTAACAGTCATATTAACGCATCTACTA
ATTCGGAACCATCCAAAATCAGCATAACTTCTTTAGATGCTATGGACATTTCCTGTGATTACAGTGGTTC
ATACCCCATGGCTGTGAGCCCTACTGAGAAAGGAAGGCACTACACGTCACATCAGACTCCAAATCAGGTC
AAGTTGGGAACATCATACAGAACTCCAAAGAGTGTGAGAAGAGGGGCAGCCCCAGTAGATGACGGGCGAA
TTCTAGGGACTCCAGATTACCTGGCACCTGAGCTCTTACTGGGTACAGCCCATGGTCCTGCAGTAGACTG
GTGGGCTCTTGGAGTTTGCTTGTTCGAATTTCTGACAGGAATTCCCCCTTTCAATGATGAAACACCACAA
CAAGTATTCCAGAATATTTTAAAAAGAGATATCCCATGGCCAGAAGGCGAAGAAAAGCTATCTGATAATG
CTCAAAGTGCAATGGACATGCTTTTAACCATTGATGATTCAAAGAGAGCTGGAATGAGAGAACTAAAACA
GCATCCTCTCTTCAGTGAAGTGGACTGGGAAAATCTGCAGCATCAGACTATGCCTTTCGTACCCCAACCA
GACGACGAAACAGATACATCCTATTTTGAAGCCAGAAATAATGCTCAACATCTGACCATATCTGGGTTTA
GTCTGTAG

Translation (865 aa):
MESASASEENEGGAAIEECVSRIPVPRPPSIEEFTIVKPISRGAFGKVYLGQKGGKLYAVKVVKKADMIN
KNMTHQVQAERDALALSKSPFVVHLYYSLQSASNIYLIMEYLIGGDVKSLLHIYGYFDEEMAIKYISEVA
LALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRDINMMDILTTPSMSKPKQDYSRTPGQV
LSLISSLGFFTPVGEKDQDSANMFSAPKSAAQLSRGFICPMSVDQKEPTSYSSKLLKSCFETLSSNPEIP
VKCLTSNLLQCRKRLGTSSTSSQSHTFVSSVESECHSNPKWERDCQSTESSGCAMSWNAVEMLYAKSTSA
IKTKTELELALSPIHDSSAIPAAGSNQVTLPRKCFREISWEARDPDNENMTIDKGQSGFCQSSQRSVNSS
ATSEEHLGKRNYKRNFHLVDSSPCQEIMQSKKNCTEYEANKERQGCRANQSTGLTTEVQNLKLSGCESQQ
LDYANKENIVTYLTDRQTPEKLHIPTIAKNLMSELDEDCELSSKKDCLSSNSVCSDEDRALKTTCVDSDS
SFPGVSMMESSLEIQALEPDKSIRDYSFEEPNTEDLFVLPKCQENSLPQDDCHACIQDSSQVSAHPSKAP
KALTSKINVVAFRSFNSHINASTNSEPSKISITSLDAMDISCDYSGSYPMAVSPTEKGRHYTSHQTPNQV
KLGTSYRTPKSVRRGAAPVDDGRILGTPDYLAPELLLGTAHGPAVDWWALGVCLFEFLTGIPPFNDETPQ
QVFQNILKRDIPWPEGEEKLSDNAQSAMDMLLTIDDSKRAGMRELKQHPLFSEVDWENLQHQTMPFVPQP
DDETDTSYFEARNNAQHLTISGFSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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