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Report for CCDS1587.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1587.1 Public Homo sapiens 1 C1orf198 24 110 108 CCDS HistoryNCBI Gene:84886Re-query CCDS DB by CCDS ID:1587.1Re-query CCDS DB by GeneID:84886See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1587.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366663.10 ENSP00000355623.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366663.10Link to Ensembl Protein Viewer:ENSP00000355623.5Re-query CCDS DB by Nucleotide ID:ENST00000366663Re-query CCDS DB by Protein ID:ENSP00000355623
Original member Current member NCBI NM_032800.3 NP_116189.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032800.3Link to Protein Sequence:NP_116189.1Re-query CCDS DB by Nucleotide ID:NM_032800Re-query CCDS DB by Protein ID:NP_116189Link to BLAST:NP_116189.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116189.1 327 Q9H425-1 327 100% 0 0

Chromosomal Locations for CCDS 1587.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 230839852 230839908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230843354 230843896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230855668 230855718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230868180 230868512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGGCGTCCATGGCGGCGGCGATCGCGGCTTCGCGCTCGGCGGTCATGAGCGGGAACCGGCCTCTGGACG
ACCGGGAGCGAAAGCGCTTCACTTACTTCTCGTCGCTGAGCCCCATGGCCAGGAAGATCATGCAGGACAA
GGAGAAGATCCGCGAGAAGTACGGGCCCGAGTGGGCGCGGCTGCCGCCCGCGCAGCAGGACGAGATCATC
GACCGGTGCCTGGTGGGGCCGCGCGCCCCGGCGCCCCGAGACCCCGGGGACTCGGAGGAGCTCACGCGCT
TCCCCGGCTTGCGCGGGCCCACGGGCCAGAAGGTGGTGCGCTTCGGGGACGAGGATCTAACTTGGCAAGA
TGAGCACTCTGCCCCTTTCTCCTGGGAAACAAAGAGTCAGATGGAGTTCAGTATCTCCGCCCTATCCATC
CAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCCCAGGGCTCCCAGG
CCCTCAAGTCCTCCCAAGGCAGCAGGTCCTCCAGCCTGGACGCCCTGGGCCCCACCAGGAAGGAGGAGGA
AGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCCGAGGGGAGGGGCCTGAGGCCGAGTTCCAGTCGCTG
ACCCCTAGCCAGATCAAGTCCATGGAGAAGGGGGAAAAGGTCTTGCCTCCCTGCTACCGGCAGGAACCTG
CCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCTTCCCAA
CGTGAGCACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCC
TCCCAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGGCAGGACGATGGGGAAGACACCCTGTTCTCGG
AACCCAAGTTTGCACAGGTCAGCTCAAGTAATGTCGTCTTGAAGACGGGATTTGATTTTCTGGACAATTG
GTAA

Translation (327 aa):
MASMAAAIAASRSAVMSGNRPLDDRERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEII
DRCLVGPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSI
QEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSL
TPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAP
SQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVVLKTGFDFLDNW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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