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Report for CCDS1629.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
1629.2 |
Public |
Homo sapiens |
1 |
AHCTF1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:25909](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:1629.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:25909](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public Note for CCDS 1629.1 |
The coding region has been updated to extend the N-terminus to one that is more supported by the available human transcript data and by sequence conservation. |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 1629.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000326225.3 |
ENSP00000355465.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000326225.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000355465.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000326225](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000355465](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_015446.5 |
NP_056261.4 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_015446.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_056261.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015446](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_056261](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_056261.4](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_056261.4 |
2275 |
Q8WYP5-3 |
2275 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 1629.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6828 nt): ATGGCGGCGGAGCGGCGCTGTGGAAGTATGCGAGACTTAAGAGCTCAAGTGACTAGTGGTCTCCTGCCAT TTCCAGAAGTGACTCTTCAAGCCCTTGGAGAAGACGAAATAACATTAGAATCTGTGCTTCGTGGAAAGTT TGCTGCAGGGAAAAATGGACTTGCTTGCTTGGCTTGTGGTCCACAACTTGAGGTAGTAAACTCTATAACA GGAGAGCGATTGTCTGCTTACAGATTCAGTGGAGTCAATGAACAGCCTCCTGTAGTTTTAGCTGTGAAAG AATTCTCTTGGCAGAAGAGAACTGGATTATTAATAGGATTGGAAGAAACAGAAGGGAGTGTTCTCTGTCT TTATGACCTTGGAATATCAAAAGTAGTTAAAGCAGTTGTTCTTCCTGGAAGGGTAACAGCTATTGAACCT ATAATTAATCATGGAGGAGCCAGTGCAAGCACTCAGCATTTACATCCAAGTCTGCGATGGCTTTTTGGAG TGGCAGCTGTGGTCACTGATGTTGGACAGATCCTTCTTGTTGACCTATGTTTGGATGACTTGTCATGCAA TCAAAATGAAGTTGAAGCATCAGATCTTGAAGTTCTAACTGGTATCCCAGCTGAAGTACCACACATTAGA GAAAGTGTAATGAGACAAGGGCGCCATCTGTGTTTCCAGTTAGTAAGTCCAACAGGAACAGCTGTTTCAA CTCTTAGTTACATAAGCAGGACAAATCAGCTTGCTGTAGGTTTTTCTGATGGCTATCTAGCACTTTGGAA CATGAAAAGCATGAAAAGAGAATATTACATACAATTGGAAAGTGGACAAGTTCCTGTATATGCTGTCACT TTTCAAGAACCTGAGAATGATCCTCGGAATTGCTGTTACTTGTGGGCTGTTCAGTCTACACAAGATAGTG AAGGGGATGTTTTGAGTTTGCATCTGCTGCAGCTGGCCTTTGGTAATAGAAAGTGTTTGGCATCAGGACA AATCTTATATGAGGGGTTAGAATACTGTGAAGAAAGATACACCCTGGACCTGACAGGTGGCATGTTCCCT TTGAGGGGACAGACGAGTAATACCAAATTGTTGGGATGCCAGAGTATAGAGAAATTTCGATCTCATGGTG ACAGGGAGGAAGGCGTGAATGAAGCTCTATCGCCTGACACTAGTGTTTCAGTCTTTACCTGGCAGGTGAA TATATATGGACAGGGAAAGCCTTCTGTATATTTGGGGCTTTTTGATATAAATCGTTGGTATCATGCACAA ATGCCAGATTCGTTAAGGTCAGGAGAATATCTACATAATTGCTCTTATTTTGCACTGTGGTCATTGGAGT CTGTTGTAAGTAGGACTTCTCCACATGGCATCTTGGATATATTAGTACATGAGAGAAGTTTAAATAGAGG AGTCCCTCCTTCATATCCACCTCCCGAGCAGTTTTTTAATCCAAGCACTTATAATTTTGATGCCACTTGT TTGTTAAACTCGGGAGTTGTTCATTTAACTTGTACTGGCTTTCAGAAGGAGACTTTGACTTTTTTAAAGA AATCAGGTCCATCACTCAATGAACTCATTCCTGATGGTTATAATCGATGTCTTGTAGCTGGCCTTCTTTC CCCAAGATTTGTTGATGTTCAGCCTTCCAGTTTAAGCCAAGAAGAACAGTTAGAAGCTATATTGTCAGCA GCAATTCAGACTAGTTCCCTGGGACTTTTGACTGGTTATATCCGAAGATGGATAACAGAAGAACAACCAA ATTCTGCCACTAATTTGCGCTTTGTTCTTGAATGGACGTGGAATAAAGTGGTTCTCACAAAAGAGGAATT TGACAGACTATGTGTGCCATTATTTGATGGTTCGTGTCATTTCATGGATCCACAAACTATACAGTCTATC CAGCAATGCTATTTGCTTCTTAGCAATCTTAATATAGTCTTGAGCTGTTTTGCATCAGAAGCCCGAGAGA TCACTGAGAGAGGACTGATAGACTTAAGCAATAAGTTTGTGGTTTCCCACCTCATCTGTCAGTATGCACA AGTGGTTCTTTGGTTCTCTCATTCTGGGCTTTTACCAGAAGGCATAGATGATTCTGTGCAGTTGTCAAGG TTATGCTACAACTACCCTGTAATTCAGAACTACTACACCAGTCGTCGACAGAAGTTTGAGCGTTTATCAA GAGGGAAGTGGAATCCCGATTGCTTGATGATTGATGGACTGGTTTCTCAGTTAGGAGAGCGAATTGAGAA GTTGTGGAAACGAGATGAAGGAGGCACAGGAAAATATCCTCCTGCTAGTCTGCATGCAGTACTTGATATG TACCTATTAGACGGCGTTACTGAAGCAGCCAAACACTCTATTACCATTTATTTGCTACTTGATATTATGT ATTCCTTTCCCAACAAAACAGACACTCCCATTGAATCTTTCCCAACTGTATTTGCCATTTCTTGGGGCCA AGTTAAACTTATTCAGGGGTTTTGGTTGATAGATCATAATGACTATGAGAGTGGTTTGGATCTTTTGTTT CATCCAGCTACTGCAAAACCTTTGTCATGGCAACATTCAAAGATTATTCAGGCATTCATGAGTCAGGGCG AGCACAGACAAGCCCTCAGATATATTCAGACAATGAAGCCAACAGTGTCCAGTGGTAACGATGTTATCCT TCACCTCACTGTTTTGCTTTTTAATAGGTGTATGGTTGAAGCCTGGAATTTTTTGCGGCAACATTGCAAT AGGTTGAATATAGAGGAGTTACTGAAGCACATGTATGAAGTCTGTCAGGAAATGGGCTTGATGGAAGATT TACTGAAGTTACCATTTACAGACACTGAGCAGGAATGTTTAGTGAAATTTTTGCAGTCCAGTGCCAGCGT TCAGAATCATGAATTCCTTTTAGTGCACCATTTGCAGCGTGCCAATTATGTGCCTGCCTTGAAGCTGAAC CAAACTCTGAAGATTAATGTTATGAATGATCGTGATCCTCGTTTGCGGGAGAGATCACTGGCTCGAAATT CTATATTAGACCAGTATGGAAAAATCCTTCCTAGAGTCCATCGAAAATTAGCCATTGAACGAGCTAAGCC TTATCATCTGTCAACATCATCAGTTTTTCGATTAGTTTCTAGACCCAAACCATTATCAGCAGTTCCAAAG CAAGTTGTAACAGGAACTGTGTTGACAAGATCTGTTTTCATCAACAATGTGTTATCTAAAATTGGAGAAG TTTGGGCAAGCAAAGAACCTATAAATAGCACCACACCTTTCAATAGTTCTAAAATAGAAGAACCATCTCC TATAGTGTATTCGCTCCCAGCTCCAGAGCTGCCTGAGGCATTTTTTGGAACACCAATTTCAAAAGCATCA CAAAAAATTTCTAGACTGCTAGATTTGGTTGTTCAGCCTGTCCCCCGGCCTTCTCAGTGTTCGGAGTTTA TTCAGCAAAGCTCCATGAAATCTCCTTTGTACCTAGTATCCCGTTCACTGCCCTCAAGTTCGCAATTAAA AGGATCGCCTCAGGCCATCTCCAGGGCTTCAGAATTACATTTGCTTGAAACTCCTCTTGTAGTTAAGAAA GCTAAAAGTTTGGCCATGTCAGTTACTACTTCTGGATTTTCTGAGTTCACTCCTCAGTCCATCCTGAGGT CTACTCTTCGATCAACACCTTTAGCATCTCCCTCTCCATCACCTGGAAGGTCTCCTCAACGACTTAAAGA AACTAGAATTTCATTTGTGGAAGAAGATGTCCACCCAAAATGGATTCCTGGGGCTGCAGATGATAGCAAA TTAGAAGTATTTACTACACCTAAAAAATGTGCAGTTCCAGTGGAAACTGAATGGCTGAAGAGCAAAGATA GGACCACATCTTTTTTCCTGAACAGCCCTGAAAAGGAGCATCAAGAAATGGATGAGGGGTCACAAAGTTT AGAGAAACTGGATGTGAGCAAAGGAAACAGCAGTGTTTCAATCACATCCGATGAGACTACCTTAGAGTAT CAGGATGCACCGTCACCGGAAGACCTTGAAGAGACTGTTTTCACGGCCTCTAAGCCCAAAAGCTCTTCCA CTGCACTAACTACTAATGTAACTGAACAAACTGAAAAGGATGGAGATAAAGATGTATTTGCATCAGAAGT AACTCCTTCAGACCTACAGAAACAAATGGGCAATTTAGAAGATGCAGAAACAAAGGATCTCTTAGTTGCA GCAGAGGCATTTTCAGAATTGAATCACTTAAGCCCGGTTCAAGGAACTGAAGCTTCTCTTTGTGCACCAT CAGTCTATGAAGGGAAAATCTTCACCCAGAAGTCCAAGGTACCAGTGTTGGACGAAGGATTAACATCTGT TGAAACCTACACCCCTGCAATTAGAGCAAATGACAATAAATCTATGGCTGATGTCCTTGGTGATGGTGGA AACTCCTCGCTCACTATCTCTGAAGGTCCTATTGTCTCTGAGCGCAGGCTTAACCAGGAAGTAGCGCTGA ACTTAAAAGAAGATCATGAAGTAGAAGTTGGTGTACTAAAAGAAAGTGTTGACTTACCAGAAGAAAAGCT TCCAATTTCTGACAGCCCTCCTGATACTCAAGAAATTCATGTGATTGAACAAGAAAAGCTTGAAGCTCAA GATTCAGGAGAAGAGGCTAGGAATCTTTCATTTAATGAGTTATATCCCTCTGGAACACTTAAGCTTCAGT ACAATTTTGATACTATTGACCAACAGTTTTGTGACTTAGCTGATAACAAAGACACTGCTGAATGTGACAT TGCTGAAGTAGATGGGGAACTTTTTGTGGCTCAAAGCAACTTTACCTTGATATTGGAAGGTGAAGAAGGA GAAGTTGAGCCAGGTGATTTTGCATCATCTGATGTGTTACCTAAAGCAGCTAACACAGCAACTGAAGAAA AACTTGTATGCAGTGGGGAAAATGATAATCATGGACAAATTGCAAATTTGCCATCTGCCGTAACTAGTGA CCAAAAGTCCCAAAAAGTAGACACTTTACCATATGTGCCTGAACCTATTAAAGTAGCAATTGCAGAAAAT TTACTAGATGTAATTAAAGACACAAGAAGTAAAGAAATTACTTCAGATACAATGGAACAGTCCATTCATG AAACAATACCTTTAGTGAGCCAAAACATAATGTGTCCCACTAAATTGGTCAAATCTGCATTTAAGACTGC TCAGGAAACAAGCACAATGACTATGAATGTCAGCCAGGTTGATGACGTGGTTTCCTCCAAAACTCGTACG AGAGGTCAACGTATCCAAAACGTGAATGTCAAATCAGCACAACAGGAAGCATCAGCAGATGTTGCTACTC CTAAGATGCCAGGGCAGTCAGTCAGGAAGAAAACTAGGAAGGCAAAAGAAATTTCTGAAGCTTCTGAAAA CATCTATTCTGATGTCAGAGGACTATCTCAGAACCAGCAAATACCTCAAAATTCTGTTACGCCTAGGAGA GGAAGGAGAAAGAAAGAAGTTAATCAGGACATACTAGAAAACACCAGTTCTGTGGAACAAGAATTACAGA TCACTACAGGTAGGGAATCAAAAAGATTAAAATCATCTCAGCTGTTGGAACCAGCAGTTGAAGAAACTAC TAAAAAAGAAGTTAAGGTTTCATCTGTTACAAAAAGGACTCCTAGAAGAATTAAAAGATCTGTAGAAAAT CAGGAAAGTGTTGAAATTATAAATGATCTAAAAGTTAGTACGGTAACAAGTCCTAGCAGAATGATCAGAA AATTGAGAAGTACTAATTTAGATGCTTCTGAAAATACAGGAAATAAGCAAGATGATAAATCCAGTGACAA GCAGCTGCGTATTAAACATGTTAGAAGGGTCAGAGGGAGAGAAGTTAGTCCATCAGATGTGAGAGAAGAC TCCAACCTTGAGTCATCTCAGTTGACTGTTCAAGCAGAATTTGATATGTCTGCCATACCTAGAAAACGTG GTAGACCAAGAAAAATCAATCCATCTGAAGATGTAGGATCTAAGGCTGTTAAGGAAGAGAGAAGCCCCAA GAAGAAAGAAGCTCCCAGCATTAGAAGGAGATCTACAAGAAATACCCCAGCTAAAAGTGAAAATGTTGAT GTTGGAAAACCAGCTTTAGGAAAATCCATTTTAGTGCCAAACGAGGAACTTTCGATGGTGATGAGCTCTA AGAAAAAACTTACAAAAAAGACTGAAAGTCAAAGCCAAAAACGTTCATTGCACTCAGTATCAGAAGAACG CACAGATGAAATGACACATAAAGAAACAAATGAGCAGGAAGAAAGATTGCTCGCCACAGCTTCCTTCACT AAATCATCCCGCAGCAGCAGGACTCGGTCTAGCAAGGCCATCTTGTTGCCGGACCTTTCTGAACCAAACA ATGAGCCTTTATTTTCTCCAGCGTCAGAAGTTCCAAGGAAAGCAAAAGCTAAAAAAATAGAGGTTCCTGC ACAGCTGAAAGAATTAGTTTCGGATTTATCTTCTCAGTTTGTCATCTCACCTCCTGCTTTAAGGAGCAGA CAAAAAAACACATCCAATAAGAACAAGCTTGAAGATGAACTGAAAGATGATGCACAATCAGTAGAAACTC TGGGAAAGCCAAAAGCGAAACGAATCAGGACGTCAAAAACAAAACAAGCAAGCAAAAACACAGAAAAAGA AAGTGCTTGGTCACCTCCTCCCATAGAAATTCGGCTGATTTCCCCCTTGGCTAGCCCAGCTGACGGAGTC AAGAGCAAACCAAGAAAAACTACAGAAGTGACAGGAACAGGTCTTGGAAGGAACAGAAAGAAACTGTCTT CCTATCCAAAGCAAATTTTACGCAGAAAAATGCTGTAA
Translation (2275 aa): MAAERRCGSMRDLRAQVTSGLLPFPEVTLQALGEDEITLESVLRGKFAAGKNGLACLACGPQLEVVNSIT GERLSAYRFSGVNEQPPVVLAVKEFSWQKRTGLLIGLEETEGSVLCLYDLGISKVVKAVVLPGRVTAIEP IINHGGASASTQHLHPSLRWLFGVAAVVTDVGQILLVDLCLDDLSCNQNEVEASDLEVLTGIPAEVPHIR ESVMRQGRHLCFQLVSPTGTAVSTLSYISRTNQLAVGFSDGYLALWNMKSMKREYYIQLESGQVPVYAVT FQEPENDPRNCCYLWAVQSTQDSEGDVLSLHLLQLAFGNRKCLASGQILYEGLEYCEERYTLDLTGGMFP LRGQTSNTKLLGCQSIEKFRSHGDREEGVNEALSPDTSVSVFTWQVNIYGQGKPSVYLGLFDINRWYHAQ MPDSLRSGEYLHNCSYFALWSLESVVSRTSPHGILDILVHERSLNRGVPPSYPPPEQFFNPSTYNFDATC LLNSGVVHLTCTGFQKETLTFLKKSGPSLNELIPDGYNRCLVAGLLSPRFVDVQPSSLSQEEQLEAILSA AIQTSSLGLLTGYIRRWITEEQPNSATNLRFVLEWTWNKVVLTKEEFDRLCVPLFDGSCHFMDPQTIQSI QQCYLLLSNLNIVLSCFASEAREITERGLIDLSNKFVVSHLICQYAQVVLWFSHSGLLPEGIDDSVQLSR LCYNYPVIQNYYTSRRQKFERLSRGKWNPDCLMIDGLVSQLGERIEKLWKRDEGGTGKYPPASLHAVLDM YLLDGVTEAAKHSITIYLLLDIMYSFPNKTDTPIESFPTVFAISWGQVKLIQGFWLIDHNDYESGLDLLF HPATAKPLSWQHSKIIQAFMSQGEHRQALRYIQTMKPTVSSGNDVILHLTVLLFNRCMVEAWNFLRQHCN RLNIEELLKHMYEVCQEMGLMEDLLKLPFTDTEQECLVKFLQSSASVQNHEFLLVHHLQRANYVPALKLN QTLKINVMNDRDPRLRERSLARNSILDQYGKILPRVHRKLAIERAKPYHLSTSSVFRLVSRPKPLSAVPK QVVTGTVLTRSVFINNVLSKIGEVWASKEPINSTTPFNSSKIEEPSPIVYSLPAPELPEAFFGTPISKAS QKISRLLDLVVQPVPRPSQCSEFIQQSSMKSPLYLVSRSLPSSSQLKGSPQAISRASELHLLETPLVVKK AKSLAMSVTTSGFSEFTPQSILRSTLRSTPLASPSPSPGRSPQRLKETRISFVEEDVHPKWIPGAADDSK LEVFTTPKKCAVPVETEWLKSKDRTTSFFLNSPEKEHQEMDEGSQSLEKLDVSKGNSSVSITSDETTLEY QDAPSPEDLEETVFTASKPKSSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQKQMGNLEDAETKDLLVA AEAFSELNHLSPVQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSVETYTPAIRANDNKSMADVLGDGG NSSLTISEGPIVSERRLNQEVALNLKEDHEVEVGVLKESVDLPEEKLPISDSPPDTQEIHVIEQEKLEAQ DSGEEARNLSFNELYPSGTLKLQYNFDTIDQQFCDLADNKDTAECDIAEVDGELFVAQSNFTLILEGEEG EVEPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAEN LLDVIKDTRSKEITSDTMEQSIHETIPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRT RGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRR GRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVEN QESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVRED SNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVD VGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFT KSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSR QKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRLISPLASPADGV KSKPRKTTEVTGTGLGRNRKKLSSYPKQILRRKML
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