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Report for CCDS16902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16902.1 Public Mus musculus 2 Dusp15 23 108 98 CCDS HistoryNCBI Gene:252864Re-query CCDS DB by CCDS ID:16902.1Re-query CCDS DB by GeneID:252864See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16902.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037715.6 ENSMUSP00000045815.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037715.6Link to Ensembl Protein Viewer:ENSMUSP00000045815.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000037715Re-query CCDS DB by Protein ID:ENSMUSP00000045815
Original member Current member NCBI NM_145744.2 NP_665687.1 Accepted alive Link to Nucleotide Sequence:NM_145744.2Link to Protein Sequence:NP_665687.1Re-query CCDS DB by Nucleotide ID:NM_145744Re-query CCDS DB by Protein ID:NP_665687Link to BLAST:NP_665687.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_665687.1 105 Q8R4V2-2 105 100% 0 0

Chromosomal Locations for CCDS 16902.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 152945103 152945157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152945427 152945501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152946288 152946337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152949038 152949120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152950621 152950654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 152951335 152951355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (318 nt):
ATGGGGAATGGCATGACCAAGGTACTTCCTGGACTCTACCTTGGAAACTTCATTGATGCCAAAGACCCGG
AT
CAGCTGGGCCGGAATAAGATCACACATATCATCTCTATCCACGAATCACCCCAGCCTCTGTTGCAGGA
T
ATCACCTACCTTCGAATCTCAGTGTCTGATACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGAATGC
GTC
CACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCACTGGCCTTTGAAGCATGAAT
GC
AGGGCTAGGTCTCTGAGTCTTCTCCAGTGCTCCTGA


Translation (105 aa):
MGNGMTKVLPGLYLGNFIDAKDPDQLGRNKITHIISIHESPQPLLQDITYLRISVSDTPEVPIKKHFKEC
V
HFIHSCRLNGGNCLVH
WPLKHECRARSLSLLQCS



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser