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Report for CCDS17054.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17054.1 Public Mus musculus 2 Dnttip1 23 108 98 CCDS HistoryNCBI Gene:76233Re-query CCDS DB by CCDS ID:17054.1Re-query CCDS DB by GeneID:76233See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 17054.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017443.13 ENSMUSP00000017443.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017443.13Link to Ensembl Protein Viewer:ENSMUSP00000017443.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000017443Re-query CCDS DB by Protein ID:ENSMUSP00000017443
Original member Current member NCBI NM_133763.1 NP_598524.1 Accepted alive Link to Nucleotide Sequence:NM_133763.1Link to Protein Sequence:NP_598524.1Re-query CCDS DB by Nucleotide ID:NM_133763Re-query CCDS DB by Protein ID:NP_598524Link to BLAST:NP_598524.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598524.1 328 Q99LB0 328 100% 0 0

Chromosomal Locations for CCDS 17054.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164746054 164746158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164746707 164746777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164747463 164747559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164754110 164754208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164757390 164757458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164757683 164757736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164758001 164758059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164759252 164759297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164763069 164763127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164763221 164763281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164765161 164765232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164767707 164767762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164767863 164768001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGGGGCGACTGGCGACACCGAGCAGCCGCGGGGCCCCGGCGGGGCGGAGCGAGGTGGCCTGGAGCTGG
GCGACGCGGGCGCGGCGGGCCAGCCGGTTCTCACGAACCCTTGGAACATAATGATAAAACATCGGCAGGT
GCAGCGAAGGGGCCGCCGATCTCAGATGACCACAAGTTTCACAGACCCAGCCATCTCTATGGATCTCCTC
CGTGCTGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAACAAGTACATGAAGTTCTTCC
AGAAGGCAGCGCTGAATGTGCGAGACAATGTTGGGGAAGAAGTGGACGCAGAGCAGTTGATTCAGGAGGC
CTGCCGCAGCTGCCTGGAGCAGGCAAAGCTGCTCTTTTCTGATGGAGAGAAAGTGATACCCAGATTGGCC
CATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTCCCACCGAGGAAGCCCCATTCCCA
AAAAGAGGAAAGGTCGGCCTCCTGGACACGTCCTGTCAAATGACCGCGCAGCTGCTGGCATGGTATGGAA
ACAAAAATCCTGTGAACCAATTCGCCGAGAAGGCCCCAAGTGGGACCCAGCTCGGCTGAATGAATCTACC
ACCTTTGTTTTGGGGTCTCGAGCCAACAAGGCCTTGGGGATGGGAGGCACCAGAGGGAGAATCTACATCA
AGCACCCACACCTCTTTAAGTATGCAGCAGATCCTCAGGACAAGCACTGGCTGGCTGAGCAGCATCACAT
GCGGGCAACAGGCGGAAAGATGGCGTACCTTCTCATTGAAGAAGACATCCGGGACTTGGCTGCCAGCGAT
GACTACAGAGGATGCTTGGACCTGAAGTTGGAGGAGCTGAAATCCTTTGTTCTGCCATCCTGGATGGTTG
AGAAGATGCGGAAATACATGGAGACACTGCGGACAGAAAATGAGCACCGCGCTGCGGAAGCGCCTCCCCA
GACCTGA

Translation (328 aa):
MGATGDTEQPRGPGGAERGGLELGDAGAAGQPVLTNPWNIMIKHRQVQRRGRRSQMTTSFTDPAISMDLL
RAVLQPSINEEIQGVFNKYMKFFQKAALNVRDNVGEEVDAEQLIQEACRSCLEQAKLLFSDGEKVIPRLA
HELPGIKRGRQAEEESHRGSPIPKKRKGRPPGHVLSNDRAAAGMVWKQKSCEPIRREGPKWDPARLNEST
TFVLGSRANKALGMGGTRGRIYIKHPHLFKYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDLAASD
DYRGCLDLKLEELKSFVLPSWMVEKMRKYMETLRTENEHRAAEAPPQT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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