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Report for CCDS1719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1719.1 Public Homo sapiens 2 KIF3C 24 110 108 CCDS HistoryNCBI Gene:3797Re-query CCDS DB by CCDS ID:1719.1Re-query CCDS DB by GeneID:3797See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264712.8 ENSP00000264712.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264712.8Link to Ensembl Protein Viewer:ENSP00000264712.3Re-query CCDS DB by Nucleotide ID:ENST00000264712Re-query CCDS DB by Protein ID:ENSP00000264712
Original member Current member EBI ENST00000405914.1 ENSP00000385030.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405914.1Link to Ensembl Protein Viewer:ENSP00000385030.1Re-query CCDS DB by Nucleotide ID:ENST00000405914Re-query CCDS DB by Protein ID:ENSP00000385030
Original member Current member NCBI NM_002254.8 NP_002245.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002254.8Link to Protein Sequence:NP_002245.4Re-query CCDS DB by Nucleotide ID:NM_002254Re-query CCDS DB by Protein ID:NP_002245Link to BLAST:NP_002245.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002245.4 793 O14782 793 100% 0 0

Chromosomal Locations for CCDS 1719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25928978 25929071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25929305 25929477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25929955 25930063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25951789 25951905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25954267 25954385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25955541 25955663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25956343 25956444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25980373 25981917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2382 nt):
ATGGCCAGTAAGACCAAGGCCAGCGAGGCCCTCAAGGTGGTGGCCCGGTGCCGCCCCCTCAGCAGGAAGG
AGGAGGCTGCTGGTCACGAGCAGATCCTGACCATGGACGTGAAACTGGGCCAGGTGACCCTGCGGAACCC
CCGCGCCGCCCCGGGGGAGCTGCCCAAGACCTTCACCTTTGACGCCGTGTATGATGCCAGCTCCAAGCAG
GCCGACCTGTATGACGAAACCGTGAGGCCCCTGATAGACTCCGTGCTCCAGGGTTTCAATGGCACGGTGT
TTGCCTATGGCCAGACGGGCACTGGCAAGACCTATACCATGCAGGGGACCTGGGTGGAGCCCGAGCTGCG
CGGGGTCATCCCGAATGCCTTTGAGCACATCTTCACCCACATCTCCCGCTCCCAGAACCAACAGTACCTG
GTCCGGGCCTCCTATTTGGAGATCTACCAGGAAGAGATTCGAGACCTGCTCTCCAAGGAGCCGGGCAAGA
GGCTAGAGCTGAAAGAGAACCCCGAGACTGGCGTCTACATCAAGGACCTCTCCTCCTTCGTCACCAAGAA
TGTCAAGGAGATTGAGCATGTGATGAACCTGGGGAACCAGACCCGGGCTGTGGGCAGCACCCACATGAAT
GAGGTCAGCTCCCGCTCCCATGCCATCTTCATCATCACTGTGGAGTGCAGCGAACGTGGCTCTGATGGCC
AGGACCACATCCGAGTGGGCAAGCTCAACCTCGTGGACCTGGCTGGCAGCGAGAGGCAGAACAAGGCAGG
CCCCAACACAGCGGGAGGGGCAGCCACACCATCCTCGGGTGGCGGTGGTGGCGGTGGAGGCAGTGGTGGT
GGTGCTGGTGGAGAGAGGCCTAAGGAAGCCTCCAAAATCAACCTCTCATTATCTGCCCTGGGCAACGTGA
TTGCTGCCCTGGCGGGCAACAGGAGCACCCACATTCCCTACCGGGACTCCAAGCTGACCCGGCTGCTCCA
GGACTCCCTGGGGGGGAATGCCAAGACCATCATGGTAGCCACACTGGGGCCAGCTTCTCACAGCTACGAT
GAGAGCCTCTCCACCTTGCGCTTTGCCAACCGAGCCAAGAACATCAAGAACAAGCCCCGGGTGAACGAGG
ACCCCAAGGACACACTGCTGCGGGAATTCCAAGAGGAGATTGCCCGCCTGAAGGCCCAGCTGGAGAAGAG
GGGGATGCTGGGGAAGCGGCCCCGGAGGAAGAGCAGCCGCAGGAAGAAGGCCGTGTCCGCCCCGCCTGGG
TACCCTGAGGGCCCAGTGATTGAGGCCTGGGTGGCAGAAGAGGAGGATGACAACAACAACAACCACCGCC
CGCCCCAGCCCATCCTGGAGTCAGCCTTGGAGAAGAACATGGAGAATTACCTGCAGGAACAGAAGGAGCG
GCTGGAGGAGGAGAAGGCAGCCATCCAGGATGACCGCAGCCTGGTGAGCGAGGAGAAGCAGAAGCTGCTG
GAGGAGAAGGAGAAGATGCTGGAGGACCTGCGGCGGGAACAGCAGGCCACAGAGCTGCTTGCGGCCAAGT
ACAAGGCCATGGAGAGCAAGCTCCTCATCGGGGGCAGGAACATCATGGATCACACCAACGAACAGCAGAA
GATGTTGGAACTGAAGAGGCAGGAGATTGCCGAGCAGAAACGTCGTGAGCGGGAGATGCAGCAGGAGATG
ATGCTCCGGGACGAGGAGACTATGGAGCTCCGGGGCACCTACACATCCCTGCAGCAGGAGGTGGAGGTCA
AAACCAAGAAACTCAAGAAGCTCTACGCCAAGCTGCAGGCGGTGAAGGCGGAGATCCAGGACCAGCATGA
TGAGTATATCCGCGTGCGGCAGGACCTGGAGGAGGCGCAGAACGAGCAGACCCGCGAACTCAAGCTCAAG
TACCTAATCATCGAGAACTTCATCCCGCCGGAGGAGAAGAACAAGATCATGAACCGGCTTTTCCTGGACT
GTGAGGAGGAGCAGTGGAAGTTCCAGCCACTGGTGCCAGCCGGCGTCAGTAGCAGCCAGATGAAGAAGCG
GCCAACATCTGCAGTGGGCTACAAGAGGCCTATCAGCCAGTATGCTCGGGTTGCCATGGCAATGGGGTCC
CACCCCAGGTACAGGGCTGAAAACATAATGTTTCTGGAGTTGGATGTGTCCCCTCCAGCTGTCTTTGAGA
TGGAATTCTCTCACGACCAAGAACAAGACCCTCGTGCGCTACACATGGAGAGGCTCATGCGATTGGACAG
CTTTCTGGAAAGACCTTCCACGTCTAAAGTCCGAAAGTCCAGATCCTGGTGCCAGAGTCCTCAGCGGCCT
CCACCTTCCACCACACATGCCTCCCTGGCCTCTGCTTCTCTGCGCCCTGCAACAGTGGCGGACCATGAGT
GA

Translation (793 aa):
MASKTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ
ADLYDETVRPLIDSVLQGFNGTVFAYGQTGTGKTYTMQGTWVEPELRGVIPNAFEHIFTHISRSQNQQYL
VRASYLEIYQEEIRDLLSKEPGKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMN
EVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGG
GAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYD
ESLSTLRFANRAKNIKNKPRVNEDPKDTLLREFQEEIARLKAQLEKRGMLGKRPRRKSSRRKKAVSAPPG
YPEGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEEEKAAIQDDRSLVSEEKQKLL
EEKEKMLEDLRREQQATELLAAKYKAMESKLLIGGRNIMDHTNEQQKMLELKRQEIAEQKRREREMQQEM
MLRDEETMELRGTYTSLQQEVEVKTKKLKKLYAKLQAVKAEIQDQHDEYIRVRQDLEEAQNEQTRELKLK
YLIIENFIPPEEKNKIMNRLFLDCEEEQWKFQPLVPAGVSSSQMKKRPTSAVGYKRPISQYARVAMAMGS
HPRYRAENIMFLELDVSPPAVFEMEFSHDQEQDPRALHMERLMRLDSFLERPSTSKVRKSRSWCQSPQRP
PPSTTHASLASASLRPATVADHE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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