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Report for CCDS17373.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17373.1 Public Mus musculus 3 P2ry12 23 108 98 CCDS HistoryNCBI Gene:70839Re-query CCDS DB by CCDS ID:17373.1Re-query CCDS DB by GeneID:70839See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17373.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050360.13 ENSMUSP00000051353.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050360.13Link to Ensembl Protein Viewer:ENSMUSP00000051353.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000050360Re-query CCDS DB by Protein ID:ENSMUSP00000051353
Original member Current member EBI ENSMUST00000170388.5 ENSMUSP00000126819.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170388.5Link to Ensembl Protein Viewer:ENSMUSP00000126819.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170388Re-query CCDS DB by Protein ID:ENSMUSP00000126819
Original member Current member EBI ENSMUST00000196583.4 ENSMUSP00000143036.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000196583.4Link to Ensembl Protein Viewer:ENSMUSP00000143036.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000196583Re-query CCDS DB by Protein ID:ENSMUSP00000143036
Original member Current member EBI ENSMUST00000199609.1 ENSMUSP00000143521.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000199609.1Link to Ensembl Protein Viewer:ENSMUSP00000143521.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000199609Re-query CCDS DB by Protein ID:ENSMUSP00000143521
Original member Current member NCBI NM_001357007.1 NP_001343936.1 Accepted alive Link to Nucleotide Sequence:NM_001357007.1Link to Protein Sequence:NP_001343936.1Re-query CCDS DB by Nucleotide ID:NM_001357007Re-query CCDS DB by Protein ID:NP_001343936Link to BLAST:NP_001343936.1
Original member Current member NCBI NM_001357008.1 NP_001343937.1 Accepted alive Link to Nucleotide Sequence:NM_001357008.1Link to Protein Sequence:NP_001343937.1Re-query CCDS DB by Nucleotide ID:NM_001357008Re-query CCDS DB by Protein ID:NP_001343937Link to BLAST:NP_001343937.1
Original member Current member NCBI NM_001357010.1 NP_001343939.1 Accepted alive Link to Nucleotide Sequence:NM_001357010.1Link to Protein Sequence:NP_001343939.1Re-query CCDS DB by Nucleotide ID:NM_001357010Re-query CCDS DB by Protein ID:NP_001343939Link to BLAST:NP_001343939.1
Original member Current member NCBI NM_027571.4 NP_081847.3 Accepted alive Link to Nucleotide Sequence:NM_027571.4Link to Protein Sequence:NP_081847.3Re-query CCDS DB by Nucleotide ID:NM_027571Re-query CCDS DB by Protein ID:NP_081847Link to BLAST:NP_081847.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001343936.1 347 Q9CPV9 347 100% 0 0
NP_001343937.1 347 Q9CPV9 347 100% 0 0
NP_001343939.1 347 Q9CPV9 347 100% 0 0
NP_081847.3 347 Q9CPV9 347 100% 0 0

Chromosomal Locations for CCDS 17373.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 59217209 59218252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1044 nt):
ATGGATGTGCCTGGTGTCAACACCACCTCAGCCAATACCACCTTCTCCCCTGGGACCAGCACCCTGTGCG
TCAGAGACTACAAGATCACCCAGGTTCTCTTCCCATTGCTGTACACCGTCCTGTTCTTTGCTGGGCTCAT
CACGAACAGCTTGGCAATGAGGATTTTCTTTCAGATCCGCAGTAAATCCAACTTCATCATTTTTCTTAAG
AACACGGTCATCTCTGATCTACTAATGATTCTAACTTTTCCATTTAAAATTCTTAGTGATGCTAAACTGG
GAGCCGGGCCTCTGAGAACCTTGGTGTGCCAAGTTACTTCAGTCACATTTTATTTTACAATGTATATCAG
TATATCGTTCCTGGGGTTGATAACCATTGACCGCTACCTGAAGACCACCAGGCCATTTAAAACGTCCAGC
CCCAGCAATCTCTTGGGTGCAAAGATTCTTTCTGTTGTCATCTGGGCCTTCATGTTCTTAATTTCACTGC
CTAACATGATTCTCACCAACAGGAGGCCAAAAGATAAGGACGTAACAAAATGTTCTTTCTTAAAGTCAGA
GTTTGGTCTAGTTTGGCACGAAATAGTCAATTACATCTGCCAAGTCATTTTCTGGATTAATTTTTTAATT
GTCATCGTTTGTTATAGCCTCATTACCAAAGAACTCTATCGGTCTTATGTCAGAACAAGGGGTTCAGCCA
AAGTTCCCAAGAAAAAGGTAAACGTCAAGGTTTTCATCATCATTGCTGTATTCTTTATTTGCTTTGTTCC
CTTCCACTTTGCACGGATTCCCTACACCCTGAGCCAAACTCGGGCCGTCTTTGACTGCAGTGCTGAGAAC
ACCCTGTTCTACGTGAAGGAGAGCACCCTATGGCTGACGTCACTGAACGCCTGCCTTGATCCATTCATCT
ACTTTTTTCTTTGCAAGTCTTTCAGAAATTCCTTGACAAGCATGCTGAGGTGCTCAAACTCTACATCAAC
ATCTGGGACAAACAAGAAGAAAGGACAAGAAGGTGGCGAACCAAGCGAAGAGACCCCAATGTAG

Translation (347 aa):
MDVPGVNTTSANTTFSPGTSTLCVRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLK
NTVISDLLMILTFPFKILSDAKLGAGPLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSS
PSNLLGAKILSVVIWAFMFLISLPNMILTNRRPKDKDVTKCSFLKSEFGLVWHEIVNYICQVIFWINFLI
VIVCYSLITKELYRSYVRTRGSAKVPKKKVNVKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCSAEN
TLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLTSMLRCSNSTSTSGTNKKKGQEGGEPSEETPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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