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Report for CCDS1757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1757.1 Public Homo sapiens 2 GCKR 24 110 108 CCDS HistoryNCBI Gene:2646Re-query CCDS DB by CCDS ID:1757.1Re-query CCDS DB by GeneID:2646See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1757.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264717.7 ENSP00000264717.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264717.7Link to Ensembl Protein Viewer:ENSP00000264717.2Re-query CCDS DB by Nucleotide ID:ENST00000264717Re-query CCDS DB by Protein ID:ENSP00000264717
Original member Current member NCBI NM_001486.4 NP_001477.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001486.4Link to Protein Sequence:NP_001477.2Re-query CCDS DB by Nucleotide ID:NM_001486Re-query CCDS DB by Protein ID:NP_001477Link to BLAST:NP_001477.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001477.2 625 Q14397-1 625 99.84% 0 1

Chromosomal Locations for CCDS 1757.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27496905 27496964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27497244 27497399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27497562 27497630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27498255 27498323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27498724 27498797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27499142 27499208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27499397 27499450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27501135 27501229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27503514 27503619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27505718 27505836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27506481 27506579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27506788 27506885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27507235 27507311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27507681 27507777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27507977 27508074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27508168 27508251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27518788 27518937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27522460 27522594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27523269 27523439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1878 nt):
ATGCCAGGCACAAAACGGTTTCAACATGTCATTGAGACCCCGGAGCCTGGCAAGTGGGAGTTGTCTGGGT
ACGAGGCAGCTGTGCCAATCACGGAGAAGTCAAACCCACTGACCCAGGATCTAGACAAAGCAGATGCTGA
GAACATTGTTCGACTGCTAGGGCAATGTGATGCTGAGATCTTCCAGGAGGAGGGGCAAGCCCTGTCCACA
TACCAGAGACTCTACAGCGAATCCATTCTGACCACCATGGTACAGGTGGCTGGGAAAGTTCAGGAAGTGC
TGAAGGAGCCAGATGGGGGGCTGGTTGTGCTGAGTGGAGGGGGCACCTCTGGCCGGATGGCATTCCTCAT
GTCGGTGTCCTTTAATCAGCTGATGAAAGGTCTGGGACAGAAACCTCTTTACACCTACCTCATTGCAGGT
GGTGACAGGTCTGTGGTGGCCTCTAGGGAGGGGACAGAAGATAGTGCCTTGCACGGGATTGAGGAACTGA
AGAAGGTGGCTGCCGGGAAGAAGAGAGTGATTGTCATTGGCATTTCTGTGGGACTCTCTGCTCCCTTTGT
GGCAGGCCAGATGGACTGCTGCATGAACAACACAGCTGTCTTCTTGCCAGTCCTGGTTGGCTTCAATCCA
GTGAGCATGGCCAGAAATGACCCCATTGAAGACTGGAGTTCAACATTCCGACAAGTAGCAGAGCGGATGC
AGAAAATGCAGGAGAAACAGAAAGCTTTTGTGCTCAATCCTGCCATCGGGCCCGAGGGTCTCAGCGGCTC
CTCCCGGATGAAAGGTGGAAGTGCCACCAAGATTCTGCTGGAAACCCTGTTATTAGCAGCCCATAAGACT
GTGGACCAGGGCATTGCAGCATCTCAAAGATGCCTCCTGGAAATCTTGCGGACATTTGAGCGAGCTCATC
AGGTGACCTACAGCCAAAGCCCCAAGATTGCCACCCTGATGAAGAGTGTCAGCACCAGTCTGGAGAAGAA
AGGCCACGTGTACCTGGTTGGCTGGCAGACCCTGGGCATCATTGCCATCATGGATGGAGTAGAGTGCATC
CACACCTTTGGTGCTGATTTCCGAGATGTCCGTGGCTTTCTCATTGGTGATCACAGTGACATGTTTAACC
AGAAGGCTGAGCTCACCAACCAGGGTCCCCAGTTCACCTTCTCCCAGGAGGACTTCCTGACTTCCATCCT
TCCCTCTCTCACGGAAATCGATACTGTGGTCTTCATTTTCACCCTGGATGACAACCTCACGGAGGTGCAG
ACTATAGTGGAGCAGGTGAAAGAGAAGACCAACCACATCCAGGCCCTGGCACACAGCACCGTGGGTCAGA
CCTTGCTGATCCCTCTGAAGAAGCTCTTTCCCTCCATCATCAGCATCACATGGCCACTGCTTTTCTTTGA
ATATGAAGGGAACTTCATCCAGAAGTTCCAGCGTGAGCTAAGCACCAAATGGGTGCTGAATACAGTGAGT
ACAGGTGCTCATGTGCTTCTTGGTAAGATCCTACAAAACCACATGTTGGACCTTCGGATTAGCAACTCCA
AGCTCTTCTGGCGGGCGCTGGCCATGCTGCAGCGGTTCTCTGGACAGTCCAAGGCTCGATGCATCGAGAG
CCTCCTCCGAGCGATCCACTTTCCCCAGCCACTGTCAGATGATATTCGGGCTGCTCCCATCTCCTGCCAT
GTCCAGGTTGCACATGAGAAGGAACAGGTGATACCCATCGCCTTGCTGAGCCTCCTATTCCGGTGCTCGA
TCACTGAGGCTCAGGCACACCTGGCTGCAGCTCCTTCTGTCTGTGAGGCTGTCAGGAGTGCTCTTGCTGG
GCCAGGTCAGAAGCGCACTGCGGACCCCCTCGAGATCCTAGAGCCTGACGTTCAGTGA

Translation (625 aa):
MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEIFQEEGQALST
YQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVSFNQLMKGLGQKPLYTYLIAG
GDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISVGLSAPFVAGQMDCCMNNTAVFLPVLVGFNP
VSMARNDPIEDWSSTFRQVAERMQKMQEKQKAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKT
VDQGIAASQRCLLEILRTFERAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECI
HTFGADFRDVRGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ
TIVEQVKEKTNHIQALAHSTVGQTLLIPLKKLFPSIISITWPLLFFEYEGNFIQKFQRELSTKWVLNTVS
TGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLRAIHFPQPLSDDIRAAPISCH
VQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEAVRSALAGPGQKRTADPLEILEPDVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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