NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS1809.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1809.1 Public Homo sapiens 2 KCNG3 24 110 108 CCDS HistoryNCBI Gene:170850Re-query CCDS DB by CCDS ID:1809.1Re-query CCDS DB by GeneID:170850See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1809.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306078.2 ENSP00000304127.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000306078.2Link to Ensembl Protein Viewer:ENSP00000304127.1Re-query CCDS DB by Nucleotide ID:ENST00000306078Re-query CCDS DB by Protein ID:ENSP00000304127
Original member Current member NCBI NM_133329.6 NP_579875.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133329.6Link to Protein Sequence:NP_579875.1Re-query CCDS DB by Nucleotide ID:NM_133329Re-query CCDS DB by Protein ID:NP_579875Link to BLAST:NP_579875.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_579875.1 436 Q8TAE7-1 436 100% 0 0

Chromosomal Locations for CCDS 1809.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 42443934 42444579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42492837 42493501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1311 nt):
ATGACCTTCGGGCGCAGCGGGGCGGCCTCGGTGGTGCTGAACGTGGGCGGCGCCCGGTATTCGCTGTCCC
GGGAGCTGCTGAAGGACTTCCCGCTGCGCCGCGTGAGCCGGCTGCACGGCTGCCGCTCCGAGCGCGACGT
GCTCGAGGTGTGCGACGACTACGACCGCGAGCGCAACGAGTACTTCTTCGACCGGCACTCGGAGGCCTTC
GGCTTCATCCTGCTCTACGTGCGCGGCCACGGCAAGCTGCGCTTCGCGCCGCGGATGTGCGAGCTCTCCT
TCTACAACGAGATGATCTACTGGGGCCTGGAGGGCGCGCACCTCGAGTACTGCTGCCAGCGCCGCCTCGA
CGACCGCATGTCCGACACCTACACCTTCTACTCGGCCGACGAGCCGGGCGTGCTGGGCCGCGACGAGGCG
CGCCCCGGCGGGGCCGAGGCGGCTCCCTCCAGGCGCTGGCTGGAGCGCATGCGGCGGACCTTCGAGGAGC
CCACGTCGTCGCTGGCCGCGCAGATCCTGGCTAGCGTGTCGGTGGTGTTCGTGATCGTGTCCATGGTGGT
GCTGTGCGCCAGCACGTTGCCCGACTGGCGCAACGCAGCCGCCGACAACCGCAGCCTGGATGACCGGAGC
AGGTACTCCGCCGGCCCTGGGAGGGAGCCCTCCGGGATAATTGAAGCTATCTGCATAGGTTGGTTCACTG
CCGAGTGCATCGTGAGGTTCATTGTCTCCAAAAACAAGTGTGAGTTTGTCAAGAGACCCCTGAACATCAT
TGATTTACTGGCAATCACGCCGTATTACATCTCTGTGTTGATGACAGTGTTTACAGGCGAGAACTCTCAA
CTCCAGAGGGCTGGAGTCACCTTGAGGGTACTTAGAATGATGAGGATTTTTTGGGTGATTAAGCTTGCCC
GTCACTTCATTGGTCTTCAGACACTCGGTTTGACTCTCAAACGTTGCTACCGAGAGATGGTTATGTTACT
TGTCTTCATTTGTGTTGCCATGGCAATCTTTAGTGCACTTTCTCAGCTTCTTGAACATGGGCTGGACCTG
GAAACATCCAACAAGGACTTTACCAGCATTCCTGCTGCCTGCTGGTGGGTGATTATCTCTATGACTACAG
TTGGCTATGGAGATATGTATCCTATCACAGTGCCTGGAAGAATTCTTGGAGGAGTTTGTGTTGTCAGTGG
AATTGTTCTATTGGCATTACCTATCACTTTTATCTACCATAGCTTTGTGCAGTGTTATCATGAGCTCAAG
TTTAGATCTGCTAGGTATAGTAGGAGCCTCTCCACTGAATTCCTGAATTAA

Translation (436 aa):
MTFGRSGAASVVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAF
GFILLYVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTYTFYSADEPGVLGRDEA
RPGGAEAAPSRRWLERMRRTFEEPTSSLAAQILASVSVVFVIVSMVVLCASTLPDWRNAAADNRSLDDRS
RYSAGPGREPSGIIEAICIGWFTAECIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVLMTVFTGENSQ
LQRAGVTLRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYREMVMLLVFICVAMAIFSALSQLLEHGLDL
ETSNKDFTSIPAACWWVIISMTTVGYGDMYPITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCYHELK
FRSARYSRSLSTEFLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH