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Report for CCDS1818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1818.1 Public Homo sapiens 2 PPM1B 24 110 108 CCDS HistoryNCBI Gene:5495Re-query CCDS DB by CCDS ID:1818.1Re-query CCDS DB by GeneID:5495See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345249.8 ENSP00000326089.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000345249.8Link to Ensembl Protein Viewer:ENSP00000326089.4Re-query CCDS DB by Nucleotide ID:ENST00000345249Re-query CCDS DB by Protein ID:ENSP00000326089
Original member Current member NCBI NM_177969.4 NP_808908.1 Accepted alive Link to Nucleotide Sequence:NM_177969.4Link to Protein Sequence:NP_808908.1Re-query CCDS DB by Nucleotide ID:NM_177969Re-query CCDS DB by Protein ID:NP_808908Link to BLAST:NP_808908.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808908.1 192 O75688-3 192 100% 0 0

Chromosomal Locations for CCDS 1818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 44209225 44209327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44217967 44218078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44218480 44218537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44230413 44230718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGAGTATTGTACTAGTTTGCTTTTCAAATGCTCCCAAGGTCTCAGATGAAGCGGTGAAAAAAGATTCAG
AGTTGGATAAGCACTTGGAATCACGGGTTGAAGAGATTATGGAGAAGTCTGGCGAGGAAGGAATGCCTGA
TCTTGCCCATGTCATGCGCATCTTGTCTGCAGAAAATATCCCAAATTTGCCTCCTGGGGGAGGTCTTGCT
GGCAAGCGTAATGTTATTGAAGCTGTTTATAGTAGACTGAATCCACATAGAGAAAGTGATGGGGCCTCCG
ATGAAGCAGAGGAAAGTGGATCACAGGGAAAATTGGTGGAAGCTCTCAGGCAAATGAGAATTAATCATAG
GGGAAACTACCGACAACTTCTGGAGGAGATGCTGACTAGTTACAGGCTAGCTAAAGTAGAGGGAGAAGAA
AGCCCTGCTGAACCAGCTGCCACAGCTACTTCTTCGAACAGTGATGCTGGAAACCCAGTGACAATGCAGG
AAAGCCATACTGAATCAGAAAGTGGTCTTGCTGAATTAGACAGCTCTAATGAAGATGCAGGGACAAAGAT
GAGTGGTGAAAAAATATGA

Translation (192 aa):
MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLA
GKRNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKVEGEE
SPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSNEDAGTKMSGEKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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