NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS1872.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1872.1 Public Homo sapiens 2 EHBP1 24 110 108 CCDS HistoryNCBI Gene:23301Re-query CCDS DB by CCDS ID:1872.1Re-query CCDS DB by GeneID:23301See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1872.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263991.9 ENSP00000263991.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000263991.9Link to Ensembl Protein Viewer:ENSP00000263991.5Re-query CCDS DB by Nucleotide ID:ENST00000263991Re-query CCDS DB by Protein ID:ENSP00000263991
Original member Current member NCBI NM_001354212.1 NP_001341141.1 Accepted alive Link to Nucleotide Sequence:NM_001354212.1Link to Protein Sequence:NP_001341141.1Re-query CCDS DB by Nucleotide ID:NM_001354212Re-query CCDS DB by Protein ID:NP_001341141Link to BLAST:NP_001341141.1
Original member Current member NCBI NM_001354213.1 NP_001341142.1 Accepted alive Link to Nucleotide Sequence:NM_001354213.1Link to Protein Sequence:NP_001341142.1Re-query CCDS DB by Nucleotide ID:NM_001354213Re-query CCDS DB by Protein ID:NP_001341142Link to BLAST:NP_001341142.1
Original member Current member NCBI NM_001354214.1 NP_001341143.1 Accepted alive Link to Nucleotide Sequence:NM_001354214.1Link to Protein Sequence:NP_001341143.1Re-query CCDS DB by Nucleotide ID:NM_001354214Re-query CCDS DB by Protein ID:NP_001341143Link to BLAST:NP_001341143.1
Original member Current member NCBI NM_015252.5 NP_056067.2 Accepted alive Link to Nucleotide Sequence:NM_015252.5Link to Protein Sequence:NP_056067.2Re-query CCDS DB by Nucleotide ID:NM_015252Re-query CCDS DB by Protein ID:NP_056067Link to BLAST:NP_056067.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341141.1 1231 Q8NDI1-1 1231 100% 0 0
NP_001341142.1 1231 Q8NDI1-1 1231 100% 0 0
NP_001341143.1 1231 Q8NDI1-1 1231 100% 0 0
NP_056067.2 1231 Q8NDI1-1 1231 100% 0 0

Chromosomal Locations for CCDS 1872.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 62707192 62707295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62747395 62747452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62764266 62764361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62771339 62771392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62826087 62826268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62831019 62831158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62858406 62858510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62859169 62859291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62864731 62864971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62874346 62874532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62942718 62942896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62943802 62943850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62948260 62949162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62955517 62955660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62979188 62979335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62987931 62988038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62990716 62990840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62993530 62993668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62993871 62993977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62996643 62996766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63037535 63037634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63038743 63038816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63045066 63045180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63045410 63045500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3696 nt):
ATGGCTTCAGTTTGGAAGAGACTGCAGCGTGTGGGAAAACATGCATCCAAGTTCCAGTTTGTGGCCTCCT
ACCAGGAGCTCATGGTTGAGTGTACGAAGAAATGGCAACCAGATAAACTGGTGGTAGTTTGGACCAGAAG
AAGCCGAAGGAAGTCTTCTAAGGCACATAGCTGGCAACCTGGAATAAAAAATCCCTATCGTGGTGTTGTT
GTGTGGCCTGTTCCTGAAAACATTGAAATCACTGTAACACTTTTTAAGGATCCTCATGCGGAAGAATTTG
AAGACAAAGAGTGGACATTTGTCATAGAAAATGAATCCCCTTCTGGTCGAAGGAAAGCTCTTGCTACTAG
CAGCATCAATATGAAACAGTATGCAAGCCCTATGCCAACTCAGACTGATGTCAAGTTAAAATTCAAGCCA
TTATCTAAAAAAGTTGTATCTGCCGCTCTTCAGTTTTCATTATCTTGCATTTTTCTGAGGGAAGGAAAAG
CCACAGATGAAGACATGCAAAGTTTGGCTAGTTTGATGAGTATGAAGCAGGCTGACATTGGCAATTTAGA
TGACTTCGAAGAAGATAATGAAGATGATGATGAGAACAGAGTGAACCAAGAAGAAAAGGCAGCTAAAATT
ACAGAAATTGTAAACCAGTTGAATGCTCTGAGCAGCTTAGATGAAGATCAAGATGACTGCATAAAGCAAG
CAAATATGCGTTCAGCTAAATCAGCCAGTTCCTCTGAAGAGCTTATCAACAAACTTAACTTTTTGGATGA
AGCAGAAAAGGACTTGGCCACCGTGAATTCAAATCCATTTGATGATCCTGATGCTGCAGAATTAAATCCA
TTTGGAGATCCTGACTCAGAAGAACCTATCACTGAAACAGCTTCACCTAGAAAAACAGAAGACTCTTTTT
ATAATAACAGCTATAATCCCTTTAAAGAGGTGCAGACTCCACAGTATTTGAACCCATTCGATGAGCCAGA
AGCATTTGTGACCATAAAGGATTCTCCTCCCCAGTCTACAAAAAGAAAAAATATAAGACCTGTGGATATG
AGCAAGTACCTCTATGCTGATAGTTCTAAAACTGAAGAAGAAGAATTGGATGAATCAAATCCTTTTTATG
AACCTAAATCAACTCCTCCTCCAAATAATTTGGTAAATCCTGTTCAAGAACTAGAAACTGAAAGGCGAGT
GAAAAGAAAGGCCCCGGCTCCACCAGTCCTCTCACCAAAAACAGGAGTATTAAATGAAAACACAGTTTCT
GCAGGAAAAGATCTCTCTACTTCTCCTAAGCCAAGCCCTATACCAAGTCCTGTTTTGGGGCGAAAGCCAA
ATGCTAGTCAGTCTTTGCTTGTATGGTGTAAAGAAGTTACAAAGAACTACCGAGGAGTAAAAATCACCAA
TTTTACTACATCGTGGAGAAATGGTTTATCTTTTTGTGCAATATTACACCACTTTAGACCAGATTTAATT
GACTACAAGTCTCTGAATCCTCAAGATATTAAAGAGAACAACAAAAAGGCATACGATGGATTTGCCAGCA
TAGGAATTTCCCGATTATTGGAACCTTCTGATATGGTATTATTAGCAATTCCTGATAAACTGACTGTTAT
GACTTATCTCTATCAAATAAGGGCACATTTCAGTGGCCAAGAACTAAATGTCGTTCAGATAGAGGAAAAC
AGCAGTAAAAGCACATATAAAGTTGGAAACTATGAAACAGATACAAACAGTTCTGTTGATCAAGAAAAAT
TCTATGCAGAGCTTAGTGATCTGAAGCGGGAGCCTGAACTACAACAGCCTATCAGCGGAGCAGTAGACTT
CTTATCACAGGATGACTCTGTATTTGTAAATGATAGCGGGGTTGGAGAGTCAGAAAGTGAGCATCAAACT
CCTGATGATCACCTTAGTCCAAGCACAGCCTCCCCTTACTGTCGCAGGACTAAAAGTGACACAGAACCCC
AGAAGTCTCAGCAGAGCTCTGGAAGGACTTCAGGATCTGATGACCCTGGAATATGTTCCAATACAGATTC
AACCCAAGCACAGGTTTTGTTAGGCAAAAAGAGACTATTGAAAGCTGAGACTTTAGAATTGAGTGACTTA
TATGTTAGTGATAAGAAGAAGGATATGTCTCCACCCTTTATTTGTGAGGAGACAGATGAACAAAAGCTTC
AAACTCTAGACATCGGTAGTAACTTGGAGAAAGAAAAATTAGAGAATTCCAGATCCTTAGAATGCAGATC
AGATCCAGAATCTCCTATCAAAAAAACAAGTTTATCTCCTACTTCTAAACTTGGATACTCATATAGTAGA
GATCTAGACCTTGCTAAGAAAAAACATGCTTCCCTGAGGCAGACGGAGTCTGATCCAGATGCTGATAGAA
CCACTTTAAATCATGCAGATCATTCATCAAAAATAGTCCAGCATCGATTGTTATCTAGACAAGAAGAACT
TAAGGAAAGAGCAAGAGTTCTGCTTGAGCAAGCAAGAAGAGATGCAGCCTTAAAGGCGGGGAATAAGCAC
AATACCAACACAGCCACCCCATTCTGCAACAGGCAGCTAAGTGATCAGCAAGATGAAGAGCGACGTCGGC
AGCTGAGAGAGAGAGCTCGTCAGCTAATAGCAGAAGCTCGATCTGGAGTGAAGATGTCAGAACTTCCCAG
CTATGGTGAAATGGCTGCAGAAAAGTTGAAAGAAAGGTCAAAGGCATCTGGAGATGAAAATGATAATATT
GAGATAGATACTAACGAGGAGATCCCTGAAGGCTTTGTTGTAGGAGGTGGAGATGAACTTACTAACTTAG
AAAATGACCTTGATACTCCCGAACAAAACAGTAAGTTGGTGGACTTGAAGCTGAAGAAGCTCCTAGAAGT
TCAGCCACAGGTGGCAAATTCACCCTCCAGTGCTGCCCAGAAAGCTGTAACTGAGAGCTCAGAGCAGGAC
ATGAAAAGTGGCACAGAAGATCTCCGGACTGAACGATTACAAAAAACAACAGAACGTTTTAGAAATCCTG
TTGTGTTCAGCAAAGATTCTACAGTCAGAAAAACTCAACTTCAGTCTTTCAGCCAATATATTGAGAATAG
ACCAGAGATGAAAAGGCAGAGATCAATACAGGAAGATACAAAGAAAGGAAATGAGGAGAAGGCAGCGATA
ACTGAAACTCAGAGGAAGCCATCAGAAGATGAAGTGCTTAATAAAGGGTTCAAAGACACCAGTCAGTATG
TAGTAGGAGAATTGGCAGCACTAGAGAATGAGCAAAAGCAAATTGACACCCGTGCCGCGCTGGTGGAGAA
GCGCCTTCGCTATCTCATGGACACAGGAAGGAACACAGAAGAAGAAGAAGCTATGATGCAGGAATGGTTT
ATGTTAGTTAATAAGAAAAATGCCTTAATAAGGAGAATGAATCAGCTCTCTCTTCTGGAAAAAGAACATG
ATTTAGAACGACGGTATGAGCTGCTGAACCGGGAATTGAGGGCAATGCTAGCCATTGAAGACTGGCAGAA
GACCGAGGCCCAGAAGCGACGCGAACAGCTTCTGCTAGATGAGCTGGTGGCCCTGGTGAACAAGCGCGAT
GCGCTCGTCAGGGACCTGGACGCGCAGGAGAAGCAGGCCGAAGAAGAAGATGAGCATTTGGAGCGAACTC
TGGAGCAAAACAAAGGCAAGATGGCCAAGAAAGAGGAGAAATGTGTTCTTCAGTAG

Translation (1231 aa):
MASVWKRLQRVGKHASKFQFVASYQELMVECTKKWQPDKLVVVWTRRSRRKSSKAHSWQPGIKNPYRGVV
VWPVPENIEITVTLFKDPHAEEFEDKEWTFVIENESPSGRRKALATSSINMKQYASPMPTQTDVKLKFKP
LSKKVVSAALQFSLSCIFLREGKATDEDMQSLASLMSMKQADIGNLDDFEEDNEDDDENRVNQEEKAAKI
TEIVNQLNALSSLDEDQDDCIKQANMRSAKSASSSEELINKLNFLDEAEKDLATVNSNPFDDPDAAELNP
FGDPDSEEPITETASPRKTEDSFYNNSYNPFKEVQTPQYLNPFDEPEAFVTIKDSPPQSTKRKNIRPVDM
SKYLYADSSKTEEEELDESNPFYEPKSTPPPNNLVNPVQELETERRVKRKAPAPPVLSPKTGVLNENTVS
AGKDLSTSPKPSPIPSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLI
DYKSLNPQDIKENNKKAYDGFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHFSGQELNVVQIEEN
SSKSTYKVGNYETDTNSSVDQEKFYAELSDLKREPELQQPISGAVDFLSQDDSVFVNDSGVGESESEHQT
PDDHLSPSTASPYCRRTKSDTEPQKSQQSSGRTSGSDDPGICSNTDSTQAQVLLGKKRLLKAETLELSDL
YVSDKKKDMSPPFICEETDEQKLQTLDIGSNLEKEKLENSRSLECRSDPESPIKKTSLSPTSKLGYSYSR
DLDLAKKKHASLRQTESDPDADRTTLNHADHSSKIVQHRLLSRQEELKERARVLLEQARRDAALKAGNKH
NTNTATPFCNRQLSDQQDEERRRQLRERARQLIAEARSGVKMSELPSYGEMAAEKLKERSKASGDENDNI
EIDTNEEIPEGFVVGGGDELTNLENDLDTPEQNSKLVDLKLKKLLEVQPQVANSPSSAAQKAVTESSEQD
MKSGTEDLRTERLQKTTERFRNPVVFSKDSTVRKTQLQSFSQYIENRPEMKRQRSIQEDTKKGNEEKAAI
TETQRKPSEDEVLNKGFKDTSQYVVGELAALENEQKQIDTRAALVEKRLRYLMDTGRNTEEEEAMMQEWF
MLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKRREQLLLDELVALVNKRD
ALVRDLDAQEKQAEEEDEHLERTLEQNKGKMAKKEEKCVLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH