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Report for CCDS19059.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19059.1 Public Mus musculus 4 9430015G10Rik 23 108 98 CCDS HistoryNCBI Gene:230996Re-query CCDS DB by CCDS ID:19059.1Re-query CCDS DB by GeneID:230996See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19059.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072554.12 ENSMUSP00000072366.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072554.12Link to Ensembl Protein Viewer:ENSMUSP00000072366.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000072554Re-query CCDS DB by Protein ID:ENSMUSP00000072366
Original member Current member EBI ENSMUST00000169550.7 ENSMUSP00000131817.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169550.7Link to Ensembl Protein Viewer:ENSMUSP00000131817.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169550Re-query CCDS DB by Protein ID:ENSMUSP00000131817
Original member Current member NCBI NM_145557.3 NP_663532.2 Accepted alive Link to Nucleotide Sequence:NM_145557.3Link to Protein Sequence:NP_663532.2Re-query CCDS DB by Nucleotide ID:NM_145557Re-query CCDS DB by Protein ID:NP_663532Link to BLAST:NP_663532.2
Original member Current member NCBI NM_177205.1 NP_796179.1 Accepted alive Link to Nucleotide Sequence:NM_177205.1Link to Protein Sequence:NP_796179.1Re-query CCDS DB by Nucleotide ID:NM_177205Re-query CCDS DB by Protein ID:NP_796179Link to BLAST:NP_796179.1

Chromosomal Locations for CCDS 19059.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 156117032 156117103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 156119164 156119239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 156121933 156122028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 156122351 156122416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 156123535 156123669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 156123976 156124001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 156124092 156124122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 156125417 156125514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGGCACTGCAGTGTCTCCTGCTCCTGACTGGCCTTCTGACAGGAGGCGTGTGCAAGTCCACAGAAAGCC
AGGCCCAGCAACCTGAGTGTTGCATGGATGTGGTAGACTTCAATGCTACCTGCCTCGGTACAGGTCTCTG
TGGCCCAGGTTGCTACAGGCACTGGAATGCAGATGGGAGCGCTAGCTGTGTCCGGTGCTGGAATGGGACC
CTCCCGACATACAATGGCTCTGAGTGTAGAATTCTCACTGGCCGGGGCGTGCAGCTTCCCATGAACAGGA
GCACGGGGACACCTGGACAGCCACATTTTGGGGGTCCTCATGTGGCAGCTTCTCTCTTCCTGGGGACACT
CTTCATCAGCACAGGCCTCATCCTCTCTGTGGCTGGATTCTTCTACCTCAAGCGCTCCAGCAAACTTCCT
GAGGTTTTCTACAGGAGAGACAGAGCCCCTGTCCTGCAGCCTGGTGAGACAGCTGCCATGGTCCCCCTGC
CACAGTCTTCAGTGAGGAAGCCAAGATACATCCGGCGTGAGCAGCACCCAGACAAGAATAGGGACCCTTC
TGCCTTCTCTACAGTGGAGGCCCACATCAGCAACGTCTGA

Translation (199 aa):
MALQCLLLLTGLLTGGVCKSTESQAQQPECCMDVVDFNATCLGTGLCGPGCYRHWNADGSASCVRCWNGT
LPTYNGSECRILTGRGVQLPMNRSTGTPGQPHFGGPHVAASLFLGTLFISTGLILSVAGFFYLKRSSKLP
EVFYRRDRAPVLQPGETAAMVPLPQSSVRKPRYIRREQHPDKNRDPSAFSTVEAHISNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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