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Report for CCDS19545.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19545.1 Public Mus musculus 5 Grk3 23 108 98 CCDS HistoryNCBI Gene:320129Re-query CCDS DB by CCDS ID:19545.1Re-query CCDS DB by GeneID:320129See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19545.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065167.8 ENSMUSP00000070445.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065167.8Link to Ensembl Protein Viewer:ENSMUSP00000070445.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000065167Re-query CCDS DB by Protein ID:ENSMUSP00000070445
Original member Current member NCBI NM_177078.4 NP_796052.2 Accepted alive Link to Nucleotide Sequence:NM_177078.4Link to Protein Sequence:NP_796052.2Re-query CCDS DB by Nucleotide ID:NM_177078Re-query CCDS DB by Protein ID:NP_796052Link to BLAST:NP_796052.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796052.2 688 Q3UYH7 688 100% 0 0

Chromosomal Locations for CCDS 19545.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 112914913 112915074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112916050 112916163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112918826 112918962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112920008 112920170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112923949 112924044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112925396 112925462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112928656 112928756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112929673 112929739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112937709 112937816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112941633 112941727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112944918 112945048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112946587 112946665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112953826 112953925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112955164 112955255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112957315 112957366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112961587 112961648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112966912 112966986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112969168 112969269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112973507 112973580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112985765 112985841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 113015367 113015479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2067 nt):
ATGGCGGACCTGGAGGCCGTGCTGGCCGACGTCAGCTACCTGATGGCCATGGAGAAGAGCAAGACGGCGC
CGGCCGCGCGCGCCAGCAAGAAGGTCGTCCTGCCGGAGCCCAGTATCCGGAGTGTGATGCAGAGGTATCT
GGCAGAGAGAAACGAAATAACCTTTGACAAGATTTTCAATCAGAAAATCGGCTTCCTACTATTTAAAGAC
TTCTGCTTGAATGAAATTGGGGAAGCAGTGCCTCAGGTGAAATTTTATGAAGAGATAAAAGAATATGAGA
AGCTGGACAACGAAGAGGATAGGCTACGCCGGAGCCGGCAGATGTACGACGCCTACATCATGAGGGAGCT
CCTATCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACAG
GTGACGGCTACACTTTTCCAGCCATACATAGAAGAAATCTGTGAAAGCCTTCGTGGGGATATTTTCCAAA
AGTTTATGGAAAGCGATAAATTCACTAGATTCTGTCAGTGGAAGAACGTGGAGTTGAATATTCACCTGAG
CATGAACGACTTCAGTGTGCACAGGATCATCGGCCGAGGAGGGTTTGGGGAAGTTTATGGCTGCAGGAAA
GCAGACACCGGTAAAATGTATGCCATGAAGTGCTTAGACAAGAAAAGGGTGAAGATGAAGCAGGGGGAGA
CTCTGGCTTTGAACGAGAGGATCATGCTGTCTCTCGTTAGCACTGGGGATTGTCCCTTTATTGTCTGCAT
GACCTACGCCTTCCACACGCCGGACAAACTCTGCTTCATCCTGGACCTGATGAACGGGGGCGACATGCAC
TACCATCTCTCTCAACACGGGGTGTTTTCTGAGAAGGAGATGCGGTTTTATGCCAGCGAGATCATCCTGG
GCCTCGAGCACATGCACACCTGCTTCGTAGTCTACAGAGACCTGAAGCCTGCGAACATCCTCCTAGATGA
ATATGGGCACGTGAGGATATCGGATCTCGGCCTTGCCTGCGATTTCTCCAAAAAGAAGCCTCATGCCAGC
GTGGGCACCCATGGGTACATGGCTCCCGAGGTGTTGCAGAAGGGAACGTGCTATGACAGCAGCGCCGACT
GGTTCTCCCTGGGCTGTATGCTCTTCAAGCTTCTGCGGGGCCACAGCCCCTTCAGGCAGCATAAAACCAA
AGACAAGCATGAGATAGACCGAATGACCCTGACCGTGAACGTGCAGCTTCCAGATGCCTTCTCCCCTGAG
CTGAGGTCCCTCTTAGAGGGTTTGCTCCAGCGGGACGTGAGCCAGCGGCTGGGCTGCGGAGGAGGAGGGG
CACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCAGCATGTGTACTTACGGAAGTACCC
GCCACCCCTAATCCCTCCTCGGGGAGAGGTCAACGCTGCAGATGCCTTCGATATCGGCTCCTTCGATGAG
GAAGACACCAAAGGCATTAAGCTGTTGGACTGTGACCAGGACCTCTATAAGAACTTCCCACTGGTGATCT
CCGAGCGCTGGCAGCAAGAAGTGGTGGAGACCATCTATGACGCCGTCAATGCTGATACTGATAAAATCGA
GGCCAGGAGGAAGGCTAAAAATAAGCAACTTGGTCAAGAGGAAGATTACGCTATGGGGAAGGACTGCATC
ATGCACGGGTACATGCTGAAGCTGGGGAACCCCTTTCTCACACAGTGGCAAAGACGCTATTTTTACCTGT
TCCCCAACAGACTGGAGTGGAGAGGAGAGGGCGAGTCTCGGCAAAGTCTACTGACCATGGAACAGATCAT
GTCTGTGGAGGAGACCCAGATTAAAGACAGAAAGTGCATCTTACTCAGGATAAAGGGAGGGAAGCAATTT
GTCTTGCAATGTGAGAGTGACCCCGAGTTTGCACAGTGGCTGAAGGAGCTGACCTGCACCTTCAATGAGG
CCCAGAGACTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACCACGGGCCGCCATCCTGGAGTTCTCCAA
GCCACCACTGTGTCACAGAAATAGCAGCGGCCTCTGA

Translation (688 aa):
MADLEAVLADVSYLMAMEKSKTAPAARASKKVVLPEPSIRSVMQRYLAERNEITFDKIFNQKIGFLLFKD
FCLNEIGEAVPQVKFYEEIKEYEKLDNEEDRLRRSRQMYDAYIMRELLSSTHQFSKQAVEHVQSHLSKKQ
VTATLFQPYIEEICESLRGDIFQKFMESDKFTRFCQWKNVELNIHLSMNDFSVHRIIGRGGFGEVYGCRK
ADTGKMYAMKCLDKKRVKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDMH
YHLSQHGVFSEKEMRFYASEIILGLEHMHTCFVVYRDLKPANILLDEYGHVRISDLGLACDFSKKKPHAS
VGTHGYMAPEVLQKGTCYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVQLPDAFSPE
LRSLLEGLLQRDVSQRLGCGGGGARELKEHIFFKGIDWQHVYLRKYPPPLIPPRGEVNAADAFDIGSFDE
EDTKGIKLLDCDQDLYKNFPLVISERWQQEVVETIYDAVNADTDKIEARRKAKNKQLGQEEDYAMGKDCI
MHGYMLKLGNPFLTQWQRRYFYLFPNRLEWRGEGESRQSLLTMEQIMSVEETQIKDRKCILLRIKGGKQF
VLQCESDPEFAQWLKELTCTFNEAQRLLRRAPKFLNKPRAAILEFSKPPLCHRNSSGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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