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Report for CCDS19725.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19725.1 Public Mus musculus 5 Eln 23 108 98 CCDS HistoryNCBI Gene:13717Re-query CCDS DB by CCDS ID:19725.1Re-query CCDS DB by GeneID:13717See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19725.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000015138.12 ENSMUSP00000015138.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000015138.12Link to Ensembl Protein Viewer:ENSMUSP00000015138.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000015138Re-query CCDS DB by Protein ID:ENSMUSP00000015138
Original member Current member NCBI NM_007925.4 NP_031951.2 Accepted alive Link to Nucleotide Sequence:NM_007925.4Link to Protein Sequence:NP_031951.2Re-query CCDS DB by Nucleotide ID:NM_007925Re-query CCDS DB by Protein ID:NP_031951Link to BLAST:NP_031951.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031951.2 860 P54320 860 100% 0 0

Chromosomal Locations for CCDS 19725.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 134703781 134703824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134704530 134704580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134705288 134705317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134705741 134705785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134706365 134706415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134706566 134706604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134707510 134707650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134707821 134707883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134707972 134708073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134710107 134710145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134711062 134711220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134712406 134712465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134712550 134712690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134713995 134714054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134715247 134715348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134715684 134715731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134716428 134716517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134716992 134717045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134718021 134718167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134718989 134719048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134719133 134719222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134721617 134721664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134722035 134722079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134722464 134722505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134724919 134724990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134725769 134725798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134726468 134726539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134728390 134728437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134729128 134729190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134729271 134729432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134729645 134729746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134731065 134731100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134732533 134732562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134736303 134736335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134737164 134737199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134739510 134739572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134747157 134747241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2583 nt):
ATGGCGGGTCTGACAGCGGTAGTCCCGCAGCCTGGCGTCTTGCTGATCCTCTTGCTCAACCTCCTCCATC
CCGCGCAGCCTGGAGGGGTTCCAGGAGCTGTGCCTGGCGGACTTCCTGGTGGAGTTCCCGGTGGAGTCTA
TTATCCAGGGGCTGGTATTGGAGGCCTGGGAGGAGGAGGAGGAGCTCTGGGACCTGGAGGAAAACCACCT
AAGCCAGGTGCCGGACTTCTGGGAACGTTTGGAGCAGGTCCTGGAGGACTTGGAGGTGCTGGCCCGGGTG
CAGGTCTCGGGGCCTTTCCTGCAGGCACCTTCCCAGGGGCAGGAGCTCTGGTGCCCGGGGGAGCAGCAGG
GGCTGCTGCGGCTTATAAAGCTGCCGCCAAAGCTGGGGCTGGGCTTGGTGGCGTTGGCGGAGTCCCAGGT
GGTGTTGGCGTTGGTGGAGTTCCAGGTGGTGTTGGAGTTGGCGGAGTCCCAGGTGGTGTTGGAGTTGGTG
GAGTCCCTGGCGGTGTTGGTGGTATTGGTGGCATCGGTGGCTTAGGAGTCTCGACAGGTGCTGTGGTGCC
CCAAGTCGGAGCTGGCATCGGAGCTGGAGGAAAGCCTGGGAAAGTTCCTGGTGTTGGTCTTCCAGGTGTA
TACCCAGGCGGAGTGCTCCCAGGAACAGGAGCTCGGTTCCCTGGTGTGGGGGTGCTCCCTGGAGTTCCCA
CTGGCACAGGAGTCAAAGCCAAGGCTCCAGGTGGAGGTGGTGCTTTTGCTGGAATCCCAGGGGTCGGACC
CTTTGGGGGTCAGCAGCCTGGTGTCCCACTGGGTTATCCCATCAAAGCACCAAAGCTGCCAGGTGGCTAC
GGACTGCCCTATACCAATGGGAAATTGCCCTATGGAGTAGCTGGTGCAGGGGGCAAGGCTGGCTACCCAA
CAGGGACAGGGGTCGGATCCCAGGCGGCGGCGGCAGCAGCTAAAGCAGCCAAGTATGGTGCTGGGGGAGC
TGGAGTCCTCCCTGGTGTTGGAGGGGGTGGCATTCCTGGTGGTGCTGGCGCAATTCCTGGGATTGGAGGC
ATTGCAGGCGCTGGAACTCCTGCAGCAGCAGCTGCTGCAAAGGCTGCTGCTAAGGCTGCTAAGTATGGAG
CTGCTGGAGGTTTAGTGCCTGGTGGACCAGGAGTTAGGCTCCCAGGTGCTGGAATCCCAGGTGTTGGTGG
CATTCCTGGTGTTGGTGGCATCCCAGGTGTTGGGGGCCCTGGTATTGGAGGTCCAGGCATTGTGGGTGGA
CCAGGAGCTGTGTCACCAGCTGCAGCTGCTAAAGCTGCTGCCAAAGCTGCCAAATACGGAGCCAGAGGTG
GAGTTGGCATCCCGACATATGGGGTTGGTGCTGGTGGCTTTCCTGGCTATGGTGTTGGAGCTGGAGCAGG
ACTTGGAGGTGCAAGCCCAGCTGCTGCTGCTGCCGCCGCCAAAGCTGCTAAGTATGGTGCTGGAGGAGCT
GGAGCCCTGGGAGGCCTGGTGCCAGGTGCAGTACCAGGTGCACTGCCAGGTGCAGTACCAGCTGTGCCGG
GAGCTGGTGGAGTGCCAGGAGCAGGTACCCCTGCAGCTGCAGCTGCTGCCGCCGCCGCTAAAGCAGCCGC
CAAAGCAGGTTTGGGTCCTGGTGTTGGTGGGGTTCCTGGTGGAGTTGGTGTTGGTGGGATTCCCGGTGGA
GTTGGTGTTGGTGGGGTTCCTGGTGGAGTTGGCCCTGGTGGTGTTACTGGTATTGGAGCTGGTCCTGGCG
GTCTTGGAGGAGCAGGGTCACCGGCTGCCGCTAAATCTGCTGCTAAGGCAGCTGCCAAAGCCCAGTACAG
AGCTGCCGCTGGGCTTGGAGCTGGTGTCCCTGGATTTGGGGCTGGTGCTGGTGTCCCCGGATTTGGGGCT
GGTGCTGGTGTCCCCGGATTTGGGGCTGGTGCTGGTGTCCCCGGATTTGGGGCTGGTGCTGGTGTCCCTG
GATTTGGAGCTGGAGCAGTACCTGGATCGCTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGG
CCTTGGTGGCCCTGGAGGTCTCGGTGGCCCTGGAGGTCTCGGTGGACCTGGAGGACTTGGTGGGGCTGGT
GTTCCCGGTAGAGTAGCAGGAGCTGCACCCCCTGCTGCTGCCGCTGCTGCTGCCAAAGCTGCTGCTAAGG
CTGCCCAGTATGGCCTTGGTGGAGCCGGAGGATTGGGAGCCGGTGGACTGGGGGCCGGTGGACTGGGAGC
CGGTGGACTGGGAGCTGGTGGACTGGGAGCCGGTGGACTGGGAGCTGGTGGACTGGGAGCCGGTGGACTG
GGAGCTGGTGGAGGTGTGTCCCCTGCTGCAGCTGCTAAGGCAGCCAAATATGGTGCTGCTGGCCTTGGAG
GTGTCCTAGGAGCCAGGCCATTCCCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGGACTTTCTCCCAT
TTATCCAGGTGGTGGTGCTGGGGGCCTGGGAGTTGGTGGAAAACCCCCGAAGCCCTATGGAGGAGCCCTT
GGAGCCCTGGGATACCAAGGTGGGGGCTGCTTTGGGAAATCCTGTGGCCGGAAGAGAAAGTGA

Translation (860 aa):
MAGLTAVVPQPGVLLILLLNLLHPAQPGGVPGAVPGGLPGGVPGGVYYPGAGIGGLGGGGGALGPGGKPP
KPGAGLLGTFGAGPGGLGGAGPGAGLGAFPAGTFPGAGALVPGGAAGAAAAYKAAAKAGAGLGGVGGVPG
GVGVGGVPGGVGVGGVPGGVGVGGVPGGVGGIGGIGGLGVSTGAVVPQVGAGIGAGGKPGKVPGVGLPGV
YPGGVLPGTGARFPGVGVLPGVPTGTGVKAKAPGGGGAFAGIPGVGPFGGQQPGVPLGYPIKAPKLPGGY
GLPYTNGKLPYGVAGAGGKAGYPTGTGVGSQAAAAAAKAAKYGAGGAGVLPGVGGGGIPGGAGAIPGIGG
IAGAGTPAAAAAAKAAAKAAKYGAAGGLVPGGPGVRLPGAGIPGVGGIPGVGGIPGVGGPGIGGPGIVGG
PGAVSPAAAAKAAAKAAKYGARGGVGIPTYGVGAGGFPGYGVGAGAGLGGASPAAAAAAAKAAKYGAGGA
GALGGLVPGAVPGALPGAVPAVPGAGGVPGAGTPAAAAAAAAAKAAAKAGLGPGVGGVPGGVGVGGIPGG
VGVGGVPGGVGPGGVTGIGAGPGGLGGAGSPAAAKSAAKAAAKAQYRAAAGLGAGVPGFGAGAGVPGFGA
GAGVPGFGAGAGVPGFGAGAGVPGFGAGAVPGSLAASKAAKYGAAGGLGGPGGLGGPGGLGGPGGLGGAG
VPGRVAGAAPPAAAAAAAKAAAKAAQYGLGGAGGLGAGGLGAGGLGAGGLGAGGLGAGGLGAGGLGAGGL
GAGGGVSPAAAAKAAKYGAAGLGGVLGARPFPGGGVAARPGFGLSPIYPGGGAGGLGVGGKPPKPYGGAL
GALGYQGGGCFGKSCGRKRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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