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Report for CCDS19819.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
19819.1 |
Public |
Mus musculus |
5 |
Eif3b |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:27979](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:19819.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:27979](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 5 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 19819.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000100507.7 |
ENSMUSP00000098076.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000100507.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000098076.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000100507](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000098076](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_133916.2 |
NP_598677.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_133916.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_598677.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_133916](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_598677](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_598677.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_598677.1 |
803 |
Q8JZQ9 |
803 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 19819.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2412 nt): ATGCAGGACGCTGAGAACGTGGCGGTGCCCGAGGCGGCCGAGGAGCGGGCTGAGCCCGCGAGGCAGCAGC CGGCCTCCGAGTCGCCGCCGACGGACGAGGCGGCAGGGTCTGGGGGGTCCGAAGTGGGGCAGACGGAAGA CGCCGAAGAAGACGCCGAGGCCGGACCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAG GAAACGGCGACGAGTCCGGCCGCCTCGCCCACGCCGCAGTCGGCGGAGCGGTCCCCGTCGCAGGAGCCCT CTGCTCCCGGGAAGGCAGAGGCCGTTGGCGAGCAGGCCCGGGGGCACCCCTCGGCTGGAGCGGAGGAGGA GGGCGGGTCTGATGGGAGCGCGGCTGAGGCGGAGCCGCGGGCTCTGGAGAACGGAGAGGCAGATGAGCCC TCCTTCAGCGACCCCGAGGATTTCGTAGACGACGTGAGCGAGGAAGAACTACTTGGTGATGTACTCAAAG ATCGGCCTCAGGAAGCGGACGGGATTGACTCGGTGATTGTTGTAGACAACGTCCCTCAGGTGGGGCCAGA CCGACTTGAGAAACTCAAAAATGTCATCCACAAGATCTTCTCCAAGTTTGGGAAAATCATAAATGACTAT TACCCTGAGGAGGACGGAAAGACGAAAGGGTACATCTTTCTGGAGTACGCTTCTCCCGCCCATGCTGTGG ATGCTGTGAAAAACGCCGATGGCTACAAGCTGGACAAGCAGCACACGTTCCGGGTCAACCTCTTCACCGA CTTTGACAAGTACATGACGATCAGCGATGAGTGGGACATTCCAGAGAAGCAGCCTTTCAAAGACCTGGGC AATTTGCGTTACTGGCTGGAAGAGGCAGAGTGTAGAGATCAGTACAGTGTGATTTTTGAGAGCGGAGACC GGACGTCCATCTTCTGGAATGACGTCAAGGACCCAGTCTCAATTGAAGAAAGAGCGAGATGGACAGAGAC GTACGTGCGCTGGTCCCCTAAGGGTACCTACCTGGCCACTTTCCATCAGCGGGGTATCGCCCTCTGGGGA GGGGACAAGTTCAAGCAGATTCAGAGGTTCAGCCACCAAGGCGTGCAGCTCATCGACTTCTCTCCGTGTG AAAGATACTTGGTAACGTTCAGCCCTCTGATGGACACTCAGGATGACCCTCAGGCCATCATCATCTGGGA CATCCTCACGGGCCATAAGAAGAGAGGTTTTCACTGCGAAAGCTCAGCCCACTGGCCCATCTTCAAGTGG AGCCATGATGGCAAATTCTTTGCAAGAATGACCCTGGATACTCTTAGCATCTATGAAACACCTTCCATGG GCCTTTTGGACAAGAAGAGTTTGAAGATCTCTGGAATTAAAGACTTTTCTTGGTCTCCGGGTGGTAACAT CATTGCTTTTTGGGTGCCTGAAGACAAAGATATTCCAGCCAGGGTGACCCTGATGCAGCTCCCCACCAGA CAGGAGATCCGAGTGAGGAATTTGTTCAATGTGGTTGATTGCAAGCTGCACTGGCAGAAAAATGGAGATT ACCTATGTGTAAAAGTGGACAGGACTCCGAAAGGCACACAGGGAGTTGTCACAAATTTTGAAATATTCCG AATGAGGGAGAAGCAGGTACCTGTTGATGTTGTTGAGATGAAAGAAACCATCATAGCCTTTGCCTGGGAA CCCAATGGCAGTAAGTTTGCCGTGCTTCATGGTGAGGCCCCTCGGATCTCTGTCTCCTTCTACCACGTGA AGAGCAACGGGAAGATTGAACTCATCAAGATGTTTGACAAGCAGCAAGCCAACACCATCTTCTGGAGTCC CCAGGGGCAGTTCGTGGTGCTGGCCGGGCTGAGGAGCATGAACGGTGCCTTGGCGTTTGTCGACACTTCA GACTGCACCGTCATGAACATTGCAGAGCACTACATGGCCTCCGATGTTGAATGGGACCCAACTGGCCGCT ACGTGGTTACCTCTGTGTCGTGGTGGAGCCACAAGGTGGACAATGCTTACTGGCTGTGGACCTTCCAAGG TCGCCTTCTGCAGAAGAACAACAAGGACCGCTTCTGCCAGCTGCTCTGGAGACCAAGGCCCCCAACACTC CTCAGCCAGGATCAGATAAAGCAAATTAAAAAGGATCTGAAGAAGTACTCCAAGATCTTTGAGCAGAAGG ATCGCTTGAGCCAGTCCAAAGCTTCAAAGGAACTGGTGGAAAGAAGGCGGACCATGATGGAGGACTTCCG GCAATACCGGAAAATGGCCCAGGAACTCTACATGAAGCAGAAGAACGAGCGTCTAGAGCTACGAGGAGGG GTGGACACTGACGAGCTGGACAGCAACGTGGATGACTGGGAGGAAGAGACCATTGAGTTTTTTGTCACCG AGGAAGTCATTCCTCTGGGAAGTCAGGAGTGA
Translation (803 aa): MQDAENVAVPEAAEERAEPARQQPASESPPTDEAAGSGGSEVGQTEDAEEDAEAGPEPEVRAKPAAQSEE ETATSPAASPTPQSAERSPSQEPSAPGKAEAVGEQARGHPSAGAEEEGGSDGSAAEAEPRALENGEADEP SFSDPEDFVDDVSEEELLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKIINDY YPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLG NLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWG GDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKW SHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTR QEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKETIIAFAWE PNGSKFAVLHGEAPRISVSFYHVKSNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTS DCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTL LSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRQYRKMAQELYMKQKNERLELRGG VDTDELDSNVDDWEEETIEFFVTEEVIPLGSQE
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