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Report for CCDS2011.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2011.1 Public Homo sapiens 2 ZNF514 24 110 108 CCDS HistoryNCBI Gene:84874Re-query CCDS DB by CCDS ID:2011.1Re-query CCDS DB by GeneID:84874See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2011.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295208.7 ENSP00000295208.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295208.7Link to Ensembl Protein Viewer:ENSP00000295208.2Re-query CCDS DB by Nucleotide ID:ENST00000295208Re-query CCDS DB by Protein ID:ENSP00000295208
Original member Current member EBI ENST00000411425.1 ENSP00000405509.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000411425.1Link to Ensembl Protein Viewer:ENSP00000405509.1Re-query CCDS DB by Nucleotide ID:ENST00000411425Re-query CCDS DB by Protein ID:ENSP00000405509
Original member Current member EBI ENST00000695456.1 ENSP00000511928.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695456.1Link to Ensembl Protein Viewer:ENSP00000511928.1Re-query CCDS DB by Nucleotide ID:ENST00000695456Re-query CCDS DB by Protein ID:ENSP00000511928
Original member Current member EBI ENST00000695457.1 ENSP00000511929.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695457.1Link to Ensembl Protein Viewer:ENSP00000511929.1Re-query CCDS DB by Nucleotide ID:ENST00000695457Re-query CCDS DB by Protein ID:ENSP00000511929
Original member Current member EBI ENST00000475040.2 ENSP00000511930.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000475040.2Link to Ensembl Protein Viewer:ENSP00000511930.2Re-query CCDS DB by Nucleotide ID:ENST00000475040Re-query CCDS DB by Protein ID:ENSP00000511930
Original member Current member EBI ENST00000695481.2 ENSP00000511953.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695481.2Link to Ensembl Protein Viewer:ENSP00000511953.1Re-query CCDS DB by Nucleotide ID:ENST00000695481Re-query CCDS DB by Protein ID:ENSP00000511953
Original member Current member EBI ENST00000698720.1 ENSP00000513894.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698720.1Link to Ensembl Protein Viewer:ENSP00000513894.1Re-query CCDS DB by Nucleotide ID:ENST00000698720Re-query CCDS DB by Protein ID:ENSP00000513894
Original member Current member EBI ENST00000698721.1 ENSP00000513895.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698721.1Link to Ensembl Protein Viewer:ENSP00000513895.1Re-query CCDS DB by Nucleotide ID:ENST00000698721Re-query CCDS DB by Protein ID:ENSP00000513895
Original member Current member EBI ENST00000698722.1 ENSP00000513896.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698722.1Link to Ensembl Protein Viewer:ENSP00000513896.1Re-query CCDS DB by Nucleotide ID:ENST00000698722Re-query CCDS DB by Protein ID:ENSP00000513896
Original member Current member EBI ENST00000698723.1 ENSP00000513897.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698723.1Link to Ensembl Protein Viewer:ENSP00000513897.1Re-query CCDS DB by Nucleotide ID:ENST00000698723Re-query CCDS DB by Protein ID:ENSP00000513897
Original member Current member NCBI NM_032788.3 NP_116177.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032788.3Link to Protein Sequence:NP_116177.1Re-query CCDS DB by Nucleotide ID:NM_032788Re-query CCDS DB by Protein ID:NP_116177Link to BLAST:NP_116177.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116177.1 400 Q96K75 400 100% 0 0

Chromosomal Locations for CCDS 2011.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 95149282 95150267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 95152674 95152769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 95153133 95153253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1203 nt):
ATGACATTTGAAGATGTGGCTGTGGAATTCAGCCAGTGGGAGTGGGGGCAGCTGAACCCTGCTCAGAAGG
ACCTCTACAGGGAGGTGATGCTGGAGAACTTCAGGAACTTGGCCATTCTGGGCCTTCTAGTATCCAAACC
ATATGTGATCTGCCAGTTGGAGGAAGGGGGTGAGCCCTTCATGGTGGAGAGAGAAATCTCAACAGGAGCC
CACTCAGACTGGAAGAGAAGGTCTAAATCCAAGGAATCAATGCCAAGTTGGGGAATTTCCAAAGAAGAAT
TATTCCAGGTAGTATCAGTGGAAAAACACATTCAAGATGTGCTGCAGTTCTCGAAGTTGAAAGCAGCCTG
CGGTTGTGATGGCCAGTTAGAGATGCAGCAGATAAAACAGGAGAGACACCTGAAACAAATGTCAACCATT
CACAAATCTGCCACCACCCTTAGCAGAGATTATAAATGGAATGGATTTGGGAGAAGCTTAGGTTTAAGAT
CAGTCCTTGTTAACCAACACAGCATTCTCATGGGAGAAGGATCTTATAAATGTGATACAGAATTCAGGCA
GACTTTAGGGGGAAACAACTCTCAGAGAACCCACCCAGAAAAGAAATCTTGTAAATGTAATGAGTGTGGG
AAGTCCTTTCACTTCCAGTCAGAACTTAGGCGCCATCAGCGATGTCACACTGGAGAAAAGCCGTATGAAT
GCAGTGACTGTGGAAGAGCCTTTGGTCATATTTCATCCCTTATTAAACATCAAAGAACTCATACTGGAGA
AAAGCCCTATGAATGCAGTGAATGTGGGAGAGCCTTCAGCCAGAGTTCGTCTCTTGTTCTGCACTATAGA
TTTCACACTGGAGAGAAACCCTACAAATGTAATGAATGTGGACGAGCCTTTGGTCACACTTCATCCCTTA
TTAAGCATCAGAGGACTCATACTGGAGAAAAGCCCTATGAATGCCGGGAATGTGGGAGAACCTTCAGCCA
GAGCTCATCACTCATTGTGCATTACAGATTTCATACTGGAGAGAAACCTTACAAATGTAATAAATGTGGG
AGAGCCTTCAGCCAGAGTTCATCTCTCACTCAACATTACAGATTTCACACTGGAGAGAAACCCTACAAAT
GTAATGAGTGTGGAAGGGCCTTTGCTCATACTGCATCCCTTATTAAACATCAGAGAAGTCATGCTGGAAA
AAAAACCCTATAA

Translation (400 aa):
MTFEDVAVEFSQWEWGQLNPAQKDLYREVMLENFRNLAILGLLVSKPYVICQLEEGGEPFMVEREISTGA
HSDWKRRSKSKESMPSWGISKEELFQVVSVEKHIQDVLQFSKLKAACGCDGQLEMQQIKQERHLKQMSTI
HKSATTLSRDYKWNGFGRSLGLRSVLVNQHSILMGEGSYKCDTEFRQTLGGNNSQRTHPEKKSCKCNECG
KSFHFQSELRRHQRCHTGEKPYECSDCGRAFGHISSLIKHQRTHTGEKPYECSECGRAFSQSSSLVLHYR
FHTGEKPYKCNECGRAFGHTSSLIKHQRTHTGEKPYECRECGRTFSQSSSLIVHYRFHTGEKPYKCNKCG
RAFSQSSSLTQHYRFHTGEKPYKCNECGRAFAHTASLIKHQRSHAGKKTL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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