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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS20392.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
20392.1 |
Public |
Mus musculus |
6 |
Pdzrn3 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 20392.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000075994.10 |
ENSMUSP00000075376.6 |
Accepted |
alive |
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NCBI |
NM_018884.2 |
NP_061372.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_061372.2 |
1063 |
Q69ZS0-1 |
1063 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 20392.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3192 nt): ATGGGTTTCGAGTTGGATCGCTTCGACGGCGACGTGGACCCTGATCTGAAGTGCGCCTTGTGCCACAAGG TCCTGGAGGACCCGCTGACCACCCCGTGCGGCCACGTATTCTGCGCCGGCTGCGTGCTGCCCTGGGTAGT GCAGGAGGGCAGCTGCCCCGCGCGTTGTCGCGGTCGCCTATCGGCCAAGGAGCTCAACCACGTCCTGCCC CTCAAGCGTCTCATCCTCAAGTTGGACATCAAGTGCGCGCACGCGGCGCGGGGCTGCGGCCGGGTGGTCA AGTTGCAGGACTTGCCCGAGCACCTGGAGCGCTGCGACTTCGCGCCCGCGCGCTGCCGCCACGCGGGCTG CGGCCAGCTGCTGCTGCGACGCGACGTGGAGGCCCACATGCGCGACGCGTGCGACGCGCGGCCCGTGGGT CGCTGCCAGGAGGGCTGCGGGCTGCCGCTGACGCACGGCGAGCAGCGGGCGGGCGGCCACTGCTGCGCGC GGGCTCTGCGGGCGCACAACGGAGCGCTGCAGGCCCGCCTGGGCGCGCTGCACAAGGCGCTCAAGAAGGA GGCGCTGCGGGCCGGCAAGCGCGAGAAGTCGCTGGTGGCGCAGCTGGCCGCCGCGCAGCTCGAACTGCAG ATGACCGCGCTGCGCTACCAGAAGAAGTTCACCGAGTACAGCGCGCGCCTCGACTCGCTCAGCCGCTGCG TGGCCGCGCCGCCAGGCGGCAAGGGAGAAGAGACCAAAAGCCTGACTCTTGTCCTGCATCGGGACTCTGG CTCCCTGGGATTCAATATCATTGGCGGCCGACCCTGTGTGGACAATCAAGATGGATCCTCCAGTGAAGGA ATCTTTGTATCCAAAATAGTTGACAGCGGGCCTGCTGCCAAGGAAGGAGGCCTGCAAATTCATGACAGGA TTATTGAGGTCAACGGCAAAGACTTATCCCGAGCAACTCATGACCAGGCTGTGGAAGCTTTCAAGACAGC CAAGGAGCCCATTGTGGTGCAGGTGTTGAGGAGGACACCTCGAACCAAGATGTTCACGCCTGCCTCAGAG TCGCAGCTGGTAGACACGGGCACCCAAACCGACATCACCTTTGAGCACATCATGGCCCTGACAAAGATGT CTTCTCCCAGCCCACCTGTGCTAGACCCCTACCTGCTGCCTGAAGAGCATCCCGCATCCCATGACTACTA TGATCCCAATGACTACATGGGGGATATCCATCAGGACATGGACAGAGAAGAGCTGGAGCTGGAAGAAGTG GGCCTCTACAGGATGAACAGCCAGGACAAGCTGGGTCTCACTGTGTGCTACCGGACGGATGACGAAGATG ACATTGGGATATATATAAGTGAGATTGACCCTAACAGCATTGCAGCCAAGGATGGACGGATCCGTGAAGG AGATCGCATCATCCAGATTAATGGCATCGAAGTACAGAACCGTGAAGAGGCCGTGGCGCTTCTAACCAGT GAAGAAAACAAGAACTTTTCATTGCTGATTGCAAGGCCTGAGCTCCAGCTGGATGAGGGCTGGATGGACG ACGACAGGAACGACTTCCTGGATGACTTACACATGGACATGCTGGAGGAACAGCATCACCAGGCCATGCA GTTCACCGCCAGTGTGCTCCAGCAGAAGAAGCATGAGGAAGACGGTGGGACCACAGACACAGCCACCATC TTATCCAACCAGCACGAGAAAGACAGTGGTGTCGGGCGAACGGATGAGAGCACCCGCAATGATGAGAGCT CAGAACAGGAGAATAACGGTGAAGATGCTACGGCATCCGCCAACCCGCTGGCAGGCCAGAGGAAGCTGAC CTGTAGCCAGGACACCCTGGGCAGTGGCGACCTGCCTTTCAGCAATGAGTCCTTCATCTCTGCGGACTGT ACCGATGTGGACTACCTGGGCATCCCAGAGGATGAGTGCGAGCGTTTTCGCGAACTGCTGGAGCTCAAGT GCCAAGTGCAGAGCGCCAGCCCCTACAGCCTGTACTACCCTAGCAGCCCACTGGATGCTGCTGGCAAGAG TGACCCCGAGAGCGTGGACAAGGAGCTGGAGCTACTCAATGAGGAGTTGCGCAGCATCGAGCTGGAGTGC CTGAGCATCGTGCGCGCGCACAAGATGCAACAGCTCAAGGAACAGTACCGTGAGTCCTGGATGCTGCACC ACAGTGGCTTCCGCAACTACAACACCAGTGTGGACGTGCGCCGCCATGAGCTCTCGGACATCACTGAGCT GCCGGAGAAGTCAGACAAGGATAGTTCAAGCGCCTACAACACGGGGGAGAGCTGCAGAAGTACCCCACTC ACCCTGGAGATCTCTCCGGACAACTCCCTGCGGAGAGTAGCCGAGGGCAGTAGTGAAGGGGCCACAGCTA ACATCGAAGCTTACAGGCCATCCCCCAAGAATCTGCTCGCCATCACTGAGGACCCTGAAGTAAGCACCCC AAGCTATAACCCTAGTGCCAAAGAGCTGGACCCCAGCCAGGCTTTGGAGATCAAAGAACGCCGAGGTAGC GATGGCAGCAGGAGCCCCACCGCCAGCCCAAAGCTGGGCAATGCCTACCTGCCCTCATACCACCACTCCC CCTACAAACACGCGCACATCCCAGCTCACGCGCAACACTACCAGAGCTACATGCACCTGATCCAGCAGAA GTCAGCAGTGGAGTATGCGCAGAGCCAGATGAGCCTGGTGAGCATGTGCAAGGACTTGAACTCTTCTAAC TCTGTGGAACCCAGGATGGAATGGAAAGTGAAGATCCGCAGTGACGGGACGCGCTACATCACCAAGAGGC CGGTGCGTGACAGGCTGCTGCGGGAGCGTGCGCTGAAGATCCGCGAGGAGCGCAGTGGCCTGACCACGGA TGATGACGCCATGAGTGAGATGAAGATGGGGCGCTACTGGAGCAAGGAGGAGCGCAAGCAACATCTGGTG AAGGCCAAGGAGCAGAGGCGGAGGCGCGAGTTTATGATGCAGAGCAGGCTGGATTGTCTGAAGGAGCAGC AGGCCTCCGACGACAGGAAGGAGATGAACATCCTGGAACTGAGCCACAAAAAGATGATGAAGAAGAGGAA CAAAAAGATCTTTGACAATTGGATGACTATCCAAGAACTCTTAACCCACGGCACAAAATCGCCAGACGGC ACTAGGGTATACAATTCCTTCCTGTCGGTGACTACTGTATAA
Translation (1063 aa): MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHVLP LKRLILKLDIKCAHAARGCGRVVKLQDLPEHLERCDFAPARCRHAGCGQLLLRRDVEAHMRDACDARPVG RCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGALHKALKKEALRAGKREKSLVAQLAAAQLELQ MTALRYQKKFTEYSARLDSLSRCVAAPPGGKGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEG IFVSKIVDSGPAAKEGGLQIHDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPASE SQLVDTGTQTDITFEHIMALTKMSSPSPPVLDPYLLPEEHPASHDYYDPNDYMGDIHQDMDREELELEEV GLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTS EENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASVLQQKKHEEDGGTTDTATI LSNQHEKDSGVGRTDESTRNDESSEQENNGEDATASANPLAGQRKLTCSQDTLGSGDLPFSNESFISADC TDVDYLGIPEDECERFRELLELKCQVQSASPYSLYYPSSPLDAAGKSDPESVDKELELLNEELRSIELEC LSIVRAHKMQQLKEQYRESWMLHHSGFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPL TLEISPDNSLRRVAEGSSEGATANIEAYRPSPKNLLAITEDPEVSTPSYNPSAKELDPSQALEIKERRGS DGSRSPTASPKLGNAYLPSYHHSPYKHAHIPAHAQHYQSYMHLIQQKSAVEYAQSQMSLVSMCKDLNSSN SVEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGLTTDDDAMSEMKMGRYWSKEERKQHLV KAKEQRRRREFMMQSRLDCLKEQQASDDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDG TRVYNSFLSVTTV
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