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Report for CCDS20660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20660.1 Public Mus musculus 6 Erp27 23 108 98 CCDS HistoryNCBI Gene:69187Re-query CCDS DB by CCDS ID:20660.1Re-query CCDS DB by GeneID:69187See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20660.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032343.6 ENSMUSP00000032343.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032343.6Link to Ensembl Protein Viewer:ENSMUSP00000032343.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000032343Re-query CCDS DB by Protein ID:ENSMUSP00000032343
Original member Current member NCBI NM_026983.2 NP_081259.1 Accepted alive Link to Nucleotide Sequence:NM_026983.2Link to Protein Sequence:NP_081259.1Re-query CCDS DB by Nucleotide ID:NM_026983Re-query CCDS DB by Protein ID:NP_081259Link to BLAST:NP_081259.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081259.1 272 Q9D8U3 272 100% 0 0

Chromosomal Locations for CCDS 20660.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 136907463 136907507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136908025 136908222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136909458 136909583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136911529 136911645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136919870 136920007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136921729 136921829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136922029 136922122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGAAAATCACCAGGTCTAGATGCCTAATCCTCTCGTTTGTCCTCGTGTGTGGGCTGGTTCCAGAGGTTA
CAGCAGATGTGGAAGAAGCCACGGATGGTCTCAGCACTACCCAGGAACCCATATGGCTCACAGACGTCCC
AGCCACCGTGGAACTCATCGCTGCTGCTGAAGTGGCAGTCATAGGCTTCTTCCAGGATTTAGAAATACCG
ATCGTGTCTGTGTTCCGGAGCATGGCACGACAGTTCCAAGATGTATCGTTTGGAATCAGCAACCATTCTG
AGGTCCTGACCCATTACAATGTCACCAGCAACAGCATCTGCCTCTTTCGACTGGTTGATGATCAACAACT
ACATTTGAATGCTGAAGACATTGAAAATCTCGATGCTGCCAAATTGAGCCGTTTTATTCACGTGAACAAC
CTCCACTGGGTGACAGAGTACAGTCCTATGATTGCAGCTGGCTTATTTAACACCATGGTTCAGACCCATC
TTCTCCTGATGATGAAGAAGACTTCCCCAGAGTATGAAGAGAGCATGCGCAGATATCGGGAGGCAGCTAA
GCTCTTCCAGGGACAGATTCTCTTTGTTCTGGTGGACAGCGGCAAAAGGGAAAATGGAAAGGTGATGTCC
TATTTCAAACTAAAAGAGTCTCAGCTGCCAGCTCTGGCCATTTATGAGTCTGTGGATGACAAGTGGGACA
CACTGCCCATCGCAGAGGTTACGGTGGAGAAGGTCCGAGGCTTCTGCGAGGGATTCTTAAAGGGGCTGCT
GCAGAGAGATCACGAAGCTGAAGGAGACTCCGGGAAGGAGGAGCTCTGA

Translation (272 aa):
MKITRSRCLILSFVLVCGLVPEVTADVEEATDGLSTTQEPIWLTDVPATVELIAAAEVAVIGFFQDLEIP
IVSVFRSMARQFQDVSFGISNHSEVLTHYNVTSNSICLFRLVDDQQLHLNAEDIENLDAAKLSRFIHVNN
LHWVTEYSPMIAAGLFNTMVQTHLLLMMKKTSPEYEESMRRYREAAKLFQGQILFVLVDSGKRENGKVMS
YFKLKESQLPALAIYESVDDKWDTLPIAEVTVEKVRGFCEGFLKGLLQRDHEAEGDSGKEEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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