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Report for CCDS20761.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20761.1 Public Mus musculus 7 Vmn1r56 23 108 98 CCDS HistoryNCBI Gene:81015Re-query CCDS DB by CCDS ID:20761.1Re-query CCDS DB by GeneID:81015See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20761.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169556.2 ENSMUSP00000128821.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169556.2Link to Ensembl Protein Viewer:ENSMUSP00000128821.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169556Re-query CCDS DB by Protein ID:ENSMUSP00000128821
Original member Current member NCBI NM_030740.1 NP_109665.1 Accepted alive Link to Nucleotide Sequence:NM_030740.1Link to Protein Sequence:NP_109665.1Re-query CCDS DB by Nucleotide ID:NM_030740Re-query CCDS DB by Protein ID:NP_109665Link to BLAST:NP_109665.1

Chromosomal Locations for CCDS 20761.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 5195684 5196616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGAAGTGTTGGCTCTTCACATCCTTTTGCTTTGCCATGTTGTAGTTGGGACTGTGGGCAACATCCTTC
TGTTTGTCCATAATTTCTCTCCAATCTTGACTGATTCCCGACTGAGGCCCATACAGGTCATTCTAATCAA
CTTGGCTGTGGCCAATGCATTCATGCTCCTTCTCTTGACATATTCACATGACATGATTGATTTTGTTCCA
AAGAACCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAAACA
TGTGTTCTACCTGTGTCCTCAGCACCTACCAGTTTGTCACTCTTGTTCCTGGTAACTGCGCTAGGGTCAT
GTTCAGAGAAATATCCCCCAAGGTCGTGAGCTATTCTTGTTTCAGTTGCTGGTTGTTCAGTGTCTTAAAT
AATGCTTATATCCCAATGAATGTCAGTGGTCCACAGAAATCACACAATGACACTGATTCTAAAGGCAATT
GTATATGCTCCGTCTCTGGGGTCAGTGTAGACATGAATTTCTTTCGTTTTTCCCATGACATCATGTTCCT
TAGCATCATGGCCTGGACCAGTGTCTCCATGGTGATTCATTTAAACAGACACCACCAGAGAATGCACTAT
ATACATAATCATAACCATAAAAACACAGGCCATGCTGAAACCAGAGCAGCCCACACCATCCTGATGCTGG
TGGTCACATTTGTGAGCTTATATATTCTAGATTGTATTTGTATTTTATTTCACATTTCCTTTGTGGAATC
TCGACTCTGGTTGAGGCATGTCATACAACTTATGACTCTAAGCTTCCCCACCATTTCTCCCTTACTGTTG
ATTTTTAGGGATCCTAGGGGTCATTGTTCTCTGCTCTTCAGTGTGGGCCTGGAAATCCACATGACTAGGG
GAGACATTACAGAGGAACAGTAA

Translation (310 aa):
MEVLALHILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVP
KNPPTDLKCKLAYFFHMVARGTNMCSTCVLSTYQFVTLVPGNCARVMFREISPKVVSYSCFSCWLFSVLN
NAYIPMNVSGPQKSHNDTDSKGNCICSVSGVSVDMNFFRFSHDIMFLSIMAWTSVSMVIHLNRHHQRMHY
IHNHNHKNTGHAETRAAHTILMLVVTFVSLYILDCICILFHISFVESRLWLRHVIQLMTLSFPTISPLLL
IFRDPRGHCSLLFSVGLEIHMTRGDITEEQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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