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Report for CCDS2077.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2077.1 Public Homo sapiens 2 SULT1C4 24 110 108 CCDS HistoryNCBI Gene:27233Re-query CCDS DB by CCDS ID:2077.1Re-query CCDS DB by GeneID:27233See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2077.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272452.7 ENSP00000272452.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272452.7Link to Ensembl Protein Viewer:ENSP00000272452.2Re-query CCDS DB by Nucleotide ID:ENST00000272452Re-query CCDS DB by Protein ID:ENSP00000272452
Original member Current member NCBI NM_006588.4 NP_006579.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006588.4Link to Protein Sequence:NP_006579.2Re-query CCDS DB by Nucleotide ID:NM_006588Re-query CCDS DB by Protein ID:NP_006579Link to BLAST:NP_006579.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006579.2 302 O75897-1 302 100% 0 0

Chromosomal Locations for CCDS 2077.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 108378338 108378506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108381762 108381887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108382385 108382482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108383093 108383219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108383416 108383510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108386192 108386372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108387320 108387432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGGCCTTACACGACATGGAGGATTTTACATTTGATGGAACAAAGCGCTTAAGTGTCAACTACGTGAAGG
GAATTCTTCAACCGACAGACACCTGTGACATCTGGGATAAGATCTGGAACTTCCAAGCCAAGCCTGATGA
CCTGCTTATTTCTACCTATCCTAAAGCAGGAACAACATGGACTCAGGAGATAGTGGAATTAATACAAAAT
GAAGGTGATGTGGAGAAAAGTAAACGGGCACCGACTCATCAACGATTTCCTTTCCTCGAAATGAAAATCC
CATCCTTAGGATCTGGTTTGGAACAAGCTCATGCAATGCCCTCACCACGGATCCTGAAAACACATCTTCC
CTTTCACTTGCTGCCACCATCCTTGCTAGAGAAAAACTGTAAGATAATCTATGTAGCAAGAAATCCCAAG
GACAACATGGTGTCCTATTACCATTTCCAAAGAATGAATAAAGCTCTTCCTGCTCCAGGAACATGGGAAG
AGTATTTTGAGACTTTTCTGGCTGGGAAAGTGTGCTGGGGCTCCTGGCATGAACATGTGAAAGGATGGTG
GGAAGCCAAAGACAAACACCGTATTCTCTATCTCTTCTATGAGGACATGAAGAAGAACCCAAAGCATGAA
ATTCAGAAGCTGGCAGAATTTATTGGGAAGAAATTAGATGACAAAGTTCTAGATAAAATTGTCCATTACA
CTTCGTTTGATGTCATGAAACAGAATCCAATGGCAAACTATTCATCGATTCCTGCTGAAATCATGGACCA
CTCCATTTCTCCATTCATGAGAAAAGGGGCAGTGGGAGACTGGAAGAAACACTTCACCGTGGCTCAGAAT
GAGAGATTTGATGAAGATTACAAGAAGAAAATGACTGATACCAGACTAACTTTCCACTTCCAGTTCTAG

Translation (302 aa):
MALHDMEDFTFDGTKRLSVNYVKGILQPTDTCDIWDKIWNFQAKPDDLLISTYPKAGTTWTQEIVELIQN
EGDVEKSKRAPTHQRFPFLEMKIPSLGSGLEQAHAMPSPRILKTHLPFHLLPPSLLEKNCKIIYVARNPK
DNMVSYYHFQRMNKALPAPGTWEEYFETFLAGKVCWGSWHEHVKGWWEAKDKHRILYLFYEDMKKNPKHE
IQKLAEFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYSSIPAEIMDHSISPFMRKGAVGDWKKHFTVAQN
ERFDEDYKKKMTDTRLTFHFQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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