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Report for CCDS20819.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20819.1 Public Mus musculus 7 Zfp324 23 108 98 CCDS HistoryNCBI Gene:243834Re-query CCDS DB by CCDS ID:20819.1Re-query CCDS DB by GeneID:243834See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20819.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038701.7 ENSMUSP00000041944.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038701.7Link to Ensembl Protein Viewer:ENSMUSP00000041944.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000038701Re-query CCDS DB by Protein ID:ENSMUSP00000041944
Original member Current member NCBI NM_178732.4 NP_848847.3 Accepted alive Link to Nucleotide Sequence:NM_178732.4Link to Protein Sequence:NP_848847.3Re-query CCDS DB by Nucleotide ID:NM_178732Re-query CCDS DB by Protein ID:NP_848847Link to BLAST:NP_848847.3

Chromosomal Locations for CCDS 20819.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 12966216 12966299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12968795 12968921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12969364 12969480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12970214 12971637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1752 nt):
ATGCCCAGGTCTCTCGCCCGTCATGCCCCGCCCCCACTGCAGATTCCGGCGGCGGCAACCTGGCCGCTGA
CAAATCCACCGCGGAGATGGATGGCCTTTGAGGACGTGGCTGTGTACTTCTCCCAGGAGGAGTGGATGTT
CCTGAATGCCGCCCAGAGGGCCTTGTACCGCCATGTAATGCTGGAAAACTTCGCACTTGTAGACTCCATA
GGACCTTCTGTCTCCCGGCCTCGTGTGATCATCCAACTCCAGCGTGGTGAGGAACCCTGGGTTCCCAACA
GGACAAATAGAGGCCCAGGCAGGGGTGCCCACAGGAGATCCAGCCTTGGATCCAATTATAGTACAAGAGA
AAGACATGTGTCTAGAACACCTCCAGGGGCCACCTGTGACAGGCCTGATAGGATACCTACTAGTATCCTT
CCTCCTGCTGGTGCCTACCCTGATGCAAAAATTCTGGAGGGACACCAAAGTGCCTGCCCATCTCTACAGA
AAAAACCCACAGGGGTATCAGTGATTTACTGGGAGCAACTCCTGCTAGGTTCCAGCAGCAGTGAAGCAAC
TGTCAGCTTGCGATTGACTTCTCCAGTAGGGGTTCCTGAAAATGGTTCATCTAGAGGGAAGGCCTTCTCT
GACTTTCTGGCCCCAGGGAAGCAGCCACGGGTAGCAGAGCAGCGAAAGCCAGAGATGCAGCTAACCCCTG
GGAGAACTTTCCAAAGCATTCCAGATCTCCATGGGGCAGAGGAGGGACGTGGGATGAGTGAGGCTTGGCA
TGAGTCTCAGGGAGACCCCAATGTTACAGAGGCCCGGATATGGGATGAGCTGGGAGAGGCCCTCCAGGCC
GGCCCAGGTCTTCTCTCTGGGGACAAACCTTTCGAATGTAGGGCGTGCAACAAAGTGTTCGTGAAGAGCT
CAGACCTCCTCAAGCATCTGCGTACTCATACCGGGGAGCGGCCTTATGAGTGCGCCCAGTGCGGCAAGGC
CTTCAGTCAGACATCTCACCTGACTCAGCACCAGCGCATCCATAGCGGTGAGACGCCTTATGTGTGCATG
GTGTGCAGCAAGGCCTTCCGACACAGCTCCTCACTGGTGCGCCATCAGCGCATCCACACAGTCGAGAAGT
CATTCCACTGCAACGAGTGTGGTAAGGCCTTCAGCCACGGCTCCAACCTCAGTCAGCACCTAAAGATACA
CGCAGGAGGGCGGCCCTATGCCTGCGCACAGTGCGGCCGCCGCTTCTGCCGCAACTCACATCTTATTCAG
CACGAACGCACGCACACCGGCGAGAAGCCCTATGCCTGCTCCCTCTGTGGCGCAGCCTTTAGTCAAGGCT
CCTCGCTCTTCAAGCACCAGCGTGTGCACACCGGAGAGAAGCCTTTCTCTTGTCCACACTGTGGCCGTGC
CTTCAGCCACAGCTCCAACCTCACACAGCATCAGCTGCTGCACACGGGCGAACGACCCTTCCGCTGCGGC
GACTGTGGCAAGGCCTTTGCCAAGGGCGCAGTGTTGCTCAGCCACAGGCGTATCCACACGGGTGAGAAGC
CCTTCGTGTGCACGCAGTGTGGCCGCGCTTTCCGTGAGCGCCCAGCCCTCTTCCATCACCAAAGGATCCA
CACAGGAGAGAAGGCCCTGAGGAGGCCCAGGGGCAGTACGCACCCCCAGGCCAGGTCTCTTGGGGTATCC
TTAGATGGCGCACCTCCAAAGGCCAGTTCTACCACAGCCCCACCAGCAGTCCCAAAGATAGCTGAGGCCT
AA

Translation (583 aa):
MPRSLARHAPPPLQIPAAATWPLTNPPRRWMAFEDVAVYFSQEEWMFLNAAQRALYRHVMLENFALVDSI
GPSVSRPRVIIQLQRGEEPWVPNRTNRGPGRGAHRRSSLGSNYSTRERHVSRTPPGATCDRPDRIPTSIL
PPAGAYPDAKILEGHQSACPSLQKKPTGVSVIYWEQLLLGSSSSEATVSLRLTSPVGVPENGSSRGKAFS
DFLAPGKQPRVAEQRKPEMQLTPGRTFQSIPDLHGAEEGRGMSEAWHESQGDPNVTEARIWDELGEALQA
GPGLLSGDKPFECRACNKVFVKSSDLLKHLRTHTGERPYECAQCGKAFSQTSHLTQHQRIHSGETPYVCM
VCSKAFRHSSSLVRHQRIHTVEKSFHCNECGKAFSHGSNLSQHLKIHAGGRPYACAQCGRRFCRNSHLIQ
HERTHTGEKPYACSLCGAAFSQGSSLFKHQRVHTGEKPFSCPHCGRAFSHSSNLTQHQLLHTGERPFRCG
DCGKAFAKGAVLLSHRRIHTGEKPFVCTQCGRAFRERPALFHHQRIHTGEKALRRPRGSTHPQARSLGVS
LDGAPPKASSTTAPPAVPKIAEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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