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Report for CCDS20864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20864.1 Public Mus musculus 7 Ceacam14 23 108 98 CCDS HistoryNCBI Gene:67084Re-query CCDS DB by CCDS ID:20864.1Re-query CCDS DB by GeneID:67084See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20864.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023953.4 ENSMUSP00000023953.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023953.4Link to Ensembl Protein Viewer:ENSMUSP00000023953.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000023953Re-query CCDS DB by Protein ID:ENSMUSP00000023953
Original member Current member NCBI NM_025957.4 NP_080233.1 Accepted alive Link to Nucleotide Sequence:NM_025957.4Link to Protein Sequence:NP_080233.1Re-query CCDS DB by Nucleotide ID:NM_025957Re-query CCDS DB by Protein ID:NP_080233Link to BLAST:NP_080233.1

Chromosomal Locations for CCDS 20864.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 17812764 17812827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17814051 17814410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17815110 17815477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGATGGACTGCGTTGCACTTTCCTGTAAAGTCTGTACCTCCTGGCAGGGGCTCCTGCTCACAGTCTCCC
TTTTAACCTGCTGGCTGATTCCCACTACTTCCCAGCTCACCATCAAATCAGTGCCTCCCATTGCTGTTGA
AGGGGAAAACGTTCTTCTGTTTGTGCATAACCTGCCGAAGAATGTTAAAGTCTTTTCCTGGTTCACAGGA
GCTAGAGTGCTCAAGAGTTGTGAAATTGCAACTCATGTGATAGCTATCAATGCTACTGTGATCGGACTTT
CACATAGTGGTAGAGAGACAGTGTTCAAAAATGGATCTCTGCTGATCAAGAGTGTCACCAGTAAAGACTC
AGGATACTACACTCTACGGATACTTGATGCAAACTCAAGACCTAAAATAATACGTACAGAATTCTTTGTA
CACAGCCCACTTTTAGGTTACAAGAAGCATCTCACCCCTTCTCAACTCAAAATTGCGTTGGTGCCACCTA
GGGTTGAAGAAAACATCAATGTTATTTTGTGGGTCTTTCAGATGCCAAAGAAGCTTCAAGCCTTTGCTTG
GCACAAAGGAGTACTTCCACTTGACCATTTGAAGATAGCAAGCCATTCATTCCTAACCAATTCAACCATG
CTGGGGCATGCATATTATGACAGATTGACAGTACGCAACGATGGGTCCTTGCTTCTCTTGAATGTCACAA
AGAATGACACAGGGCTTTACACCCTACGAACCATATCTGTTGATTTGAAATTAGAATGGGCCATTATTGA
AGTCCAAGTAAACAGTAAATGA

Translation (263 aa):
MMDCVALSCKVCTSWQGLLLTVSLLTCWLIPTTSQLTIKSVPPIAVEGENVLLFVHNLPKNVKVFSWFTG
ARVLKSCEIATHVIAINATVIGLSHSGRETVFKNGSLLIKSVTSKDSGYYTLRILDANSRPKIIRTEFFV
HSPLLGYKKHLTPSQLKIALVPPRVEENINVILWVFQMPKKLQAFAWHKGVLPLDHLKIASHSFLTNSTM
LGHAYYDRLTVRNDGSLLLLNVTKNDTGLYTLRTISVDLKLEWAIIEVQVNSK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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