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Report for CCDS20973.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20973.1 Public Mus musculus 7 Dedd2 23 108 98 CCDS HistoryNCBI Gene:67379Re-query CCDS DB by CCDS ID:20973.1Re-query CCDS DB by GeneID:67379See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20973.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058702.6 ENSMUSP00000049763.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058702.6Link to Ensembl Protein Viewer:ENSMUSP00000049763.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000058702Re-query CCDS DB by Protein ID:ENSMUSP00000049763
Original member Current member EBI ENSMUST00000205271.1 ENSMUSP00000146052.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000205271.1Link to Ensembl Protein Viewer:ENSMUSP00000146052.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000205271Re-query CCDS DB by Protein ID:ENSMUSP00000146052
Original member Current member NCBI NM_207677.3 NP_997560.3 Accepted alive Link to Nucleotide Sequence:NM_207677.3Link to Protein Sequence:NP_997560.3Re-query CCDS DB by Nucleotide ID:NM_207677Re-query CCDS DB by Protein ID:NP_997560Link to BLAST:NP_997560.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997560.3 330 Q8QZV0 330 100% 0 0

Chromosomal Locations for CCDS 20973.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25203540 25203931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25211149 25211298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25217545 25217667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25218801 25219128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGCGTTGTCCGGGTCGACCCCGGCCCCGAGCTGGGAGGAGGATGAGTGTTTGGATTACTACGGCATGC
TGTCGCTTCACCGTATGTTCGAGGTAGTGGGCGGGCAGCTGACCGAGTGCGAACTGGAGCTCCTGGCCTT
CCTGCTGGATGAGGCCCCCGGCGCCCCCGGCGGCCTGGCCCGCGCCCGCAGCGGCCTGGAGCTGCTTCTG
GAGCTGGAACGCCGCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGAGCCAACTCCTGCGCGTGCTAG
CCCGTCACGACCTCCTGCCACATCTGGCGCGCAAGCGGCGCCGGCCAGTGTCCCCTGAGCGATACAGCTA
TGGCAATCCCAGCTCTTCTTCCAAGAGGACAGAGGACAGTTGCCGGCGTCGGCGACAGGCGAGCAGTTCT
TCGGACTCTCCTCAGAGTCAGTGGGACACAGGCTCCCCACCAACCAAGCGGCAGCGGCGGAGTCGGGGCC
GCCCTAGCAGTGGTGCCCGGCAGCGGCGGAGAGCAGGCCTTGCAGCCTCGCAGCAGCACCAGCAGCACCA
GGAGTTGGGCAGGCCCTCCTCAGAAGGCAAGGTGACCTGTGACATCCGGCTCCGGGTTCGGGCAGAGTAC
TGCGAGCATGGGCCAGCCTTGGAGCAGGGTGTGGCGTCCCGGAGACCTCAGGCGTTGGCCCGGCAGCTGG
ATGTGTTTGGACAAGCCACTGCTGTGCTGCGGTCAAGGGACCTGGGCTCTGTGGTGTGTGACATCAAGTT
CTCAGAGCTGTCCTATCTGGACGCCTTCTGGGGCGACTACCTGAGTGGCGCCCTGCTGCAGGCCCTTCGG
GGCGTGTTCCTGACTGAGGCTTTACGGGAGGCCGTGGGCCGAGAGGCTGTCCGCTTGCTGGTCAGTGTGG
ACGAGGCTGACTATGAGGCTGGCCGGCGTCGCCTGTTGCTGATGGAGGAGGAAGGAGGGCGGCGTGGGAC
CGAGGCCTCCTGA

Translation (330 aa):
MALSGSTPAPSWEEDECLDYYGMLSLHRMFEVVGGQLTECELELLAFLLDEAPGAPGGLARARSGLELLL
ELERRGQCDESNLRLLSQLLRVLARHDLLPHLARKRRRPVSPERYSYGNPSSSSKRTEDSCRRRRQASSS
SDSPQSQWDTGSPPTKRQRRSRGRPSSGARQRRRAGLAASQQHQQHQELGRPSSEGKVTCDIRLRVRAEY
CEHGPALEQGVASRRPQALARQLDVFGQATAVLRSRDLGSVVCDIKFSELSYLDAFWGDYLSGALLQALR
GVFLTEALREAVGREAVRLLVSVDEADYEAGRRRLLLMEEEGGRRGTEAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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