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Report for CCDS21349.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21349.2 Public Mus musculus 7 Adamts17 23 108 98 CCDS HistoryNCBI Gene:233332Re-query CCDS DB by CCDS ID:21349.2Re-query CCDS DB by GeneID:233332See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by CCDS collaboration)

Sequence IDs included in CCDS 21349.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098382.9 ENSMUSP00000095984.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098382.9Link to Ensembl Protein Viewer:ENSMUSP00000095984.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098382Re-query CCDS DB by Protein ID:ENSMUSP00000095984
Original member Current member NCBI NM_001033877.4 NP_001029049.2 Accepted alive Link to Nucleotide Sequence:NM_001033877.4Link to Protein Sequence:NP_001029049.2Re-query CCDS DB by Nucleotide ID:NM_001033877Re-query CCDS DB by Protein ID:NP_001029049Link to BLAST:NP_001029049.2

Chromosomal Locations for CCDS 21349.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 66839836 66839911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66840248 66840618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66849707 66849872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66888301 66888470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66908593 66908676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66909331 66909488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66915851 66915894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66968809 66968914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67002458 67002598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67004340 67004490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67027807 67027908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67029575 67029720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67041785 67041951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67047462 67047589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67051917 67052037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67062066 67062146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67070589 67070746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67075303 67075462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67078242 67078377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67120811 67121015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67124925 67125077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67147561 67147738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 67149900 67150066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3369 nt):
ATGTGTGACGGCACCCTGCTGCCCCCTCTCGTCCTGTCCTTGCTGCTGCTGGTGTGGGGGCTGGACCCGG
GCACAGCTGTCGGCGACGCGGCGGCCGACGTGGAGGTGGTGCTCCCGAGGCGGCTGCGCCCCGAGGACGT
GCACCTGCAGTTGCTGCCGGGAGCAGCGGGGCTCCGGCGGTGGCGGCGACCGCGAGCATCTCCAGGTGGC
CATCGAGCAGGGCAAGGAGAGCGCGCCCTGCTACTGCACCTGCCGGCCTTTGGGCGCGACCTATACCTGC
AGCTGCATCGCGACCTGCGTTTCCTGTCCCCAGGCTTCGAGGTGGAGGAGGCGGGTGTCTCGGGGCGCAG
CGGACATCCTGCCGAGCTGTGCTTCTACTCCGGACGAGTCCTGGGCCACCCGGGCTCCCTCGTCTCCCTC
AGCGCCTGCGGCGCCGCCGGCGGCCTGGTTGGCCTCATCCAGCTTGAGCAGGAGCAAGTTTTCATCCAGC
CCCTCAACTCCTCAGGGGGCCCATTCATTGGAAGAGAGCATCTGATCAGACGCAAATGGGCCTCCACCCC
CAGCCCTGCTACGGAGGTGGAGGGACCGAGGCAGCGCTGCAAAGTAGTGACAGAAAAGAAGCCCAGGAAG
GACCATCTGTCTCGGGACTGGAGGGAAAGGAGGAATGCCATCCGGCTCACCAACGAACACACAGTGGAGA
CCCTGGTGGTGGCCGATGCCGACATGGTGCAGTACCACGGGGCAGAGGCTGCACAAAGATTCATCCTCAC
TGTCATGAACATGGTATACAACATGTTTCAGCACAGGAGCCTTGGGATTAAAATTAACATTCAAGTCACC
AAGCTGGTCCTTCTGAGACAACGCCCCGCCAAGTTATCCATTGGGCACCATGGTGAGCGGTCCCTGGAGA
GCTTCTGTCACTGGCAGAATGAGGAGTATGGAGGAGCACGCTACCTTGGCAATAACCAGGTGCCAGGAGG
CAAGGATGATACACCTCCTGTGGATGCTGCTGTATTTGTGACCAGGACAGATTTCTGCGTTCACAAAGAT
GAACCTTGCGACACTGTTGGAATTGCTTACTTAGGAGGCGTGTGCAGTGCTAAGAGGAAATGTGTGCTCG
CCGAAGACAATGGTCTCAATTTGGCCTTTACCATCGCACATGAACTGGGCCACAACCTGGGGATGAACCA
TGATGACGACCACTCATCTTGTGCTGGCCGGTCGCACATCATGTCCGGAGAGTGGGTAAAAGGACGGAAT
CCCAGCGACCTCTCTTGGTCATCCTGTAGTCGAGATGACCTTGAGAACTTTCTCAAATCCAAAGTCAGTA
CATGTTTACTGATCACTGATCCCAGGAGCCAGCATGCCCTGCGCCTTCCACACAAGCTGCCAGGCATGCA
CTACAGCGCCAACGAGCAGTGCCAGATTCTGTTTGGCACCAATGCTACCTTCTGCAAAAACATGGAGCAT
TTGATGTGTGCTGGGCTGTGGTGCCTGGTAGAGGGAGACACATCCTGCAAGACCAAGCTGGACCCTCCCC
TGGATGGCACTGAATGTGGAGCAGACAAGTGGTGCCGGGCTGGAGAGTGTGTGAGCAAGACGCCCATCCC
AGAGCACGTGGACGGGGACTGGAGTCTGTGGAGCGCCTGGAGCATGTGCAGCCGAACCTGTGGTACAGGA
GCGCGATTCCGGCAGAGGAAATGTGACAACCCCCCCCCTGGACCTGGTGGCACACACTGCCAGGGTGCCA
GCGTAGAACATGCTGCCTGTGAGAAGCTGCCCTGCCCCAAGGGTGTGCCCAGCTTCCGGGACCAGCAGTG
CCAAGCCCATGACCGACTGAGCAGCAAGAAGAGAGGCCTGTTGACAGCAGTGGTGGTTGATGATAAACCC
TGTGAACTCTACTGTTCACCCCTCGGGAAGGAGTCCCCGCTGCTGGTGGCTGACAGGGTCCTGGATGGCA
CACCCTGTGGACCCTACGAGGCTGACCTCTGCGTGTATGGCAGATGCCAGAAAATTGGATGTGACGGCAT
CATCGGATCTGCGGCTAAAGAAGATAGGTGTGGTGTCTGCAGCGGGGATGGCAAGACCTGCCGTGTGGTG
AAGGGTGACTTCAGCCACTCCCGGGGGACAGGTTATATCGAAGCGGTTGTCATTCCGGTTGGAGCTCGGC
GGATCCGTGTGGTGGAAGACAAACCTGCTCACAGCTTCCTGGCTCTCAAAGATTCCAGTAAGAGATCCAT
CAACAGCGACTGGAAGATAGAACTCCCTGGAGAGTTCCAGATTGCAGGTACAACCGTCCGCTACGTGAGG
AGAGGCTTGTGGGAGAAGTTCTCAGCCAAGGGACCCACCACAGTGCCGCTGCATCTGATGGTGCTGTTAT
TTCATGACCAGAATTACGGAATTCATTATGAGTACACCATACCTGTAAACCAGAGTTCAGAAAACCAGAG
TGAGCCCGCCAAGCCACAAGATGCTCTGTTCCTCTGGACCCACAGCGGCTGGGAAGGGTGCAGTGTGCAG
TGTGGAGGAGGAGAACGCAGGACTATCGTATCATGCACACGGATTGTTAACAAGACTACAACCCTGGTGA
ATGACAGTGACTGCCCCCAAGCAAGCCGCCCTGAGCCCCAGGTCCGACGGTGTAACTCTCACCCATGCCA
GTCCCGGTGGGTGACTGGTCAGTGGAGCCCCTGCTCAGCGACCTGTGAGAAGGGCGTGCAGCATCGGGAG
GTGACTTGCGTGTACCAGCTCCAGAACGGCACACACGTCACTACTCGGCCCATCTACTGCTCAGAACCCC
GGCCAACACCGGTACAGAGCTGTGAAGGCCAGGACTGCCTGTCTATCTGGGAGGCTTCAGAGTGGTCAGA
GTGCTCTGCCAACTGCGGCAAAGGGATCCAAAAACGGACTGTGACATGTACCAACTCCCAAGGGAAATGT
GACGCGTCCACAAGGCCGAAAGCAGAGGAGGAGTGCGAGGACTACTCTGGCTGCTATGAGTGGAAAACGG
GGGACTGGTCTAAGTGCTCGTCCACCTGTGGGAAGGGGCTTCAGTCAAGAGTGGTCCAGTGTATGCACAA
GCTCACTGGACGCCATGGCAGTGAGTGCCCGACTCTCTCAAAGCCAGCAGCCTACAGACAGTGCCACCAG
GAGGTCTGCAACGAGAAGATCAATGTGAACACCATCACCTCCCCTCGCCTTGCCGCTCTGACCTACAAAT
GCACTCGGGACCAGTGGACGGTGTACTGCCGGGTCATCCGAGAGAAGAACCTCTGCCAGGATATGCGATG
GTACCAGCGCTGCTGCCAGACCTGTAGGGACTTCTACGCAGATAAGATGCGCCAGCCGCCCTCTCCACCA
AGCTCGTGA

Translation (1122 aa):
MCDGTLLPPLVLSLLLLVWGLDPGTAVGDAAADVEVVLPRRLRPEDVHLQLLPGAAGLRRWRRPRASPGG
HRAGQGERALLLHLPAFGRDLYLQLHRDLRFLSPGFEVEEAGVSGRSGHPAELCFYSGRVLGHPGSLVSL
SACGAAGGLVGLIQLEQEQVFIQPLNSSGGPFIGREHLIRRKWASTPSPATEVEGPRQRCKVVTEKKPRK
DHLSRDWRERRNAIRLTNEHTVETLVVADADMVQYHGAEAAQRFILTVMNMVYNMFQHRSLGIKINIQVT
KLVLLRQRPAKLSIGHHGERSLESFCHWQNEEYGGARYLGNNQVPGGKDDTPPVDAAVFVTRTDFCVHKD
EPCDTVGIAYLGGVCSAKRKCVLAEDNGLNLAFTIAHELGHNLGMNHDDDHSSCAGRSHIMSGEWVKGRN
PSDLSWSSCSRDDLENFLKSKVSTCLLITDPRSQHALRLPHKLPGMHYSANEQCQILFGTNATFCKNMEH
LMCAGLWCLVEGDTSCKTKLDPPLDGTECGADKWCRAGECVSKTPIPEHVDGDWSLWSAWSMCSRTCGTG
ARFRQRKCDNPPPGPGGTHCQGASVEHAACEKLPCPKGVPSFRDQQCQAHDRLSSKKRGLLTAVVVDDKP
CELYCSPLGKESPLLVADRVLDGTPCGPYEADLCVYGRCQKIGCDGIIGSAAKEDRCGVCSGDGKTCRVV
KGDFSHSRGTGYIEAVVIPVGARRIRVVEDKPAHSFLALKDSSKRSINSDWKIELPGEFQIAGTTVRYVR
RGLWEKFSAKGPTTVPLHLMVLLFHDQNYGIHYEYTIPVNQSSENQSEPAKPQDALFLWTHSGWEGCSVQ
CGGGERRTIVSCTRIVNKTTTLVNDSDCPQASRPEPQVRRCNSHPCQSRWVTGQWSPCSATCEKGVQHRE
VTCVYQLQNGTHVTTRPIYCSEPRPTPVQSCEGQDCLSIWEASEWSECSANCGKGIQKRTVTCTNSQGKC
DASTRPKAEEECEDYSGCYEWKTGDWSKCSSTCGKGLQSRVVQCMHKLTGRHGSECPTLSKPAAYRQCHQ
EVCNEKINVNTITSPRLAALTYKCTRDQWTVYCRVIREKNLCQDMRWYQRCCQTCRDFYADKMRQPPSPP
SS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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