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Report for CCDS21423.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21423.1 Public Mus musculus 7 Or14c46 23 108 98 CCDS HistoryNCBI Gene:258222Re-query CCDS DB by CCDS ID:21423.1Re-query CCDS DB by GeneID:258222See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21423.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081918.2 ENSMUSP00000080589.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081918.2Link to Ensembl Protein Viewer:ENSMUSP00000080589.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000081918Re-query CCDS DB by Protein ID:ENSMUSP00000080589
Original member Current member EBI ENSMUST00000217724.1 ENSMUSP00000151989.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217724.1Link to Ensembl Protein Viewer:ENSMUSP00000151989.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217724Re-query CCDS DB by Protein ID:ENSMUSP00000151989
Original member Current member NCBI NM_001011520.2 NP_001011520.2 Accepted alive Link to Nucleotide Sequence:NM_001011520.2Link to Protein Sequence:NP_001011520.2Re-query CCDS DB by Nucleotide ID:NM_001011520Re-query CCDS DB by Protein ID:NP_001011520Link to BLAST:NP_001011520.2

Chromosomal Locations for CCDS 21423.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 86268789 86269787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGGCCAATTCCACCCTAGTGACTGAGTTCTTCCTGGAGGTTTTTGCTGAGATTTGGGAGCTCAGGATCT
TAATCACTGTGCTGTTCCTGCTGGTGTATCTGTGCAGCCTGTTAGGGAACCTTACCATCATCATTGTTAC
TACAGTTGACCAGACCCTGAACACACCCATGTACTTCTTCCTCAGGAATCTGTCCATTTTAGACATGGGC
TACATTTCTATCACTGTCCCCAGTACCTGTATCAACTCTCTCACTAACCACAGGAATATGTCTGTGGCTG
GGTGTGCAGCACAAATCTTTTCGTTCTTATTTTGTGCATGTGTAGAGATTCTAGTTTTTTCCATCATGGC
CCAAGACCGCTATGTGGCCATCTGCAAGCCTCTGCTCTATCCTGTGATCATGAACCACCAGTTCTGTGTT
CAGATGACACTGGCTTCCCTACTCAGCTCCCTTGTCATTGCAAGTGTGCACACTTTCAAAACTTTCCAGC
TGTCCTTCTGTCACTCTAATGTGGTCCCTCAGTTCTTCTGTGATCTTCCTGCTTTGCTGAGACTTTCTTG
CTCTGACACCTTTAGCAACAAACTCCTAATACTTCTGACTGTCATTGGAGTCAGTGGTAGTTGCTTTGTC
TTCATTGCCATATCATATATTCACATATTATCAACTGTATTGAAGATTCCCGTCAAAGGAGAGAGAGGGA
AAGCCTTTTCTACCTGTGTTCCTCACATTATTGTGGTGTCTGTCTTTGTTAGTTCTGCTGCCTTTGTGTA
TCTACGACCTCCAGTAATAACCTTTGAAGTAGTTCAGGAAATGGTTATTTCTGTATTTTATACCATGGTT
CCACCATTCTTAAACCCAATTGTCTATAGTCTTAGAAACAAACAGATAAAGGAGGCAGTGAGGAAAGTTA
TATTGCGAGTTTTTCCCATATTTGAATATAAAAGGAACATCTATTTCTCATGGTATTTTAGAGGGAAAAA
AACTGATAAAGTAAGATAA

Translation (332 aa):
MANSTLVTEFFLEVFAEIWELRILITVLFLLVYLCSLLGNLTIIIVTTVDQTLNTPMYFFLRNLSILDMG
YISITVPSTCINSLTNHRNMSVAGCAAQIFSFLFCACVEILVFSIMAQDRYVAICKPLLYPVIMNHQFCV
QMTLASLLSSLVIASVHTFKTFQLSFCHSNVVPQFFCDLPALLRLSCSDTFSNKLLILLTVIGVSGSCFV
FIAISYIHILSTVLKIPVKGERGKAFSTCVPHIIVVSVFVSSAAFVYLRPPVITFEVVQEMVISVFYTMV
PPFLNPIVYSLRNKQIKEAVRKVILRVFPIFEYKRNIYFSWYFRGKKTDKVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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