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Report for CCDS21515.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
21515.1 |
Public |
Mus musculus |
7 |
Inppl1 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:16332](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:21515.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:16332](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 21515.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000035836.13 |
ENSMUSP00000048057.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000035836.13](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000048057.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000035836](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000048057](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000165052.7 |
ENSMUSP00000132883.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000165052.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000132883.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000165052](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000132883](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_001122739.1 |
NP_001116211.1 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_001122739.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001116211.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001122739](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001116211](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001122739.2 |
NP_001116211.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001122739.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001116211.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001122739](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001116211](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001116211.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_010567.2 |
NP_034697.2 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_010567.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_034697.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_010567](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_034697](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_010567.3 |
NP_034697.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_010567.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_034697.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_010567](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_034697](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_034697.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 21515.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3774 nt): ATGGCCTCAGTGTGTGGGACACCGAGTCCCGGGGGTGCGCTAGGCAGCCCGGCCCCAGCCTGGTATCACC GTGACCTGAGCCGCGCTGCTGCGGAGGAGCTCCTGGCTCGGGCGGGCCGCGATGGCAGCTTCCTGGTGCG AGATAGCGAGAGCGTGGCGGGGGCCTTCGCACTCTGCGTCCTGTATCAAAAGCACGTGCACACCTACCGC ATTCTGCCAGATGGAGAGGATTTCCTGGCTGTGCAGACCTCACAGGGTGTTCCTGTGCGTCGCTTCCAGA CCCTGGGTGAGCTTATAGGCCTATATGCCCAGCCCAACCAGGGTCTTGTTTGTGCCCTGCTGCTGCCTGT AGAGGGGGAGAGAGAGCCAGACCCACCAGATGACCGAGATGCCTCAGATGTGGAGGACGAGAAGCCCCCA CTACCCCCGCGCTCTGGCTCTACCAGCATTTCTGCCCCTGTGGGGCCCAGCAGCCCCCTGCCGACTCCCG AGACTCCCACAACTCCAGCAGCTGAGAGCACTCCTAATGGACTCAGCACTGTGTCACATGAGTATCTGAA GGGCAGCTACGGGCTGGACCTGGAGGCTGTACGAGGTGGAGCCAGCAACTTGCCACATCTCACCAGAACC CTTGTCACCTCGTGCCGAAGGCTACACAGCGAGGTGGACAAGGTCCTGTCAGGCTTGGAGATCCTGTCGA AGGTGTTTGACCAGCAGAGCTCGCCCATGGTGACCCGCCTTTTACAGCAGCAGAGCTTACCACAGACTGG AGAGCAGGAGCTGGAGAGCCTTGTGCTGAAGCTATCTGTGTTAAAGGACTTCCTGTCAGGCATCCAGAAG AAGGCCCTAAAGGCACTGCAGGACATGAGCTCCACAGCGCCTCCGGCTCCATTGCAGCCCTCCATACGCA AGGCCAAGACCATCCCCGTGCAGGCCTTTGAGGTGAAGCTGGATGTAACACTGGGTGACCTGACCAAGAT TGGGAAGTCCCAGAAGTTCACGCTGAGTGTGGATGTCGAGGGTGGGAGGCTGGTTCTGCTGAGGAGACAG CGTGACTCCCAGGAGGACTGGACAACCTTCACACATGACCGGATCCGGCAGCTCATTAAATCCCAGCGTG TGCAGAACAAGCTGGGTGTTGTGTTTGAAAAGGAGAAAGATCGGACCCAGCGCAAGGACTTCATCTTTGT CAGTGCCCGGAAACGAGAAGCCTTCTGCCAGCTCCTGCAGCTCATGAAGAACAGGCACTCCAAGCAGGAC GAGCCCGACATGATCTCTGTCTTCATAGGCACCTGGAACATGGGAAGTGTACCACCACCCAAAAACGTGA CATCTTGGTTCACATCAAAGGGACTGGGGAAAGCTCTGGATGAGGTCACAGTGACTATACCCCACGATAT CTATGTCTTTGGGACTCAGGAGAACTCAGTGGGTGACAGAGAGTGGCTGGATCTGCTGCGTGGGGGCCTC AAGGAGCTTACAGATCTGGATTACCGTCCGATTGCTATGCAGTCACTATGGAACATCAAGGTGGCTGTGT TGGTCAAGCCAGAACATGAGAATCGCATCAGCCACGTCAGTACGTCCAGTGTGAAGACTGGTATCGCCAA CACCCTGGGGAACAAGGGAGCCGTGGGTGTGTCCTTCATGTTCAATGGCACCTCATTTGGCTTCGTGAAT TGCCATCTCACCTCAGGGAATGAGAAGACTACTCGGCGGAACCAGAATTATCTGGACATTCTGCGTCTCC TCTCGTTGGGTGATCGGCAGCTCAGTGCCTTTGACATCTCTTTGCGGTTCACTCATCTCTTCTGGTTTGG GGACCTTAACTACCGCTTAGACATGGATATCCAGGAGATCCTGAACTACATTAGTAGGAGAGAGTTTGAG CCTCTGCTCAGGGTGGACCAGCTCAACCTGGAGCGGGAGAAGCATAAGGTCTTCCTTCGATTTAGTGAGG AGGAGATATCTTTCCCACCCACCTACCGCTACGAGCGGGGTTCCCGGGACACATACGCTTGGCACAAGCA GAAGCCAACTGGGGTCCGGACCAATGTGCCTTCGTGGTGTGACCGGATTCTATGGAAATCCTATCCTGAA ACCCACATCATCTGCAATTCCTATGGTTGCACTGATGACATTGTTACCAGTGACCATTCTCCTGTGTTTG GGACATTTGAGGTTGGAGTTACTTCCCAGTTCATCTCCAAGAAAGGTCTCTCTAAGACCTCAGATCAAGC CTACATTGAGTTTGAGAGTATCGAAGCCATTGTGAAGACAGCCAGCCGCACCAAGTTCTTCATTGAGTTC TATTCTACCTGCTTGGAAGAGTATAAGAAGAGCTTCGAGAATGATGCTCAGAGCAGCGACAACATCAATT TCCTCAAGGTGCAGTGGTCCTCCCGCCAGCTACCCACGCTCAAGCCAATTCTGGCTGACATTGAGTACCT GCAGGATCAGCATCTCCTGCTCACAGTCAAGTCCATGGATGGCTACGAATCATATGGGGAGTGTGTGGTT GCACTCAAGTCCATGATTGGCAGCACAGCCCAGCAGTTCCTGACCTTCTTGTCCCACCGTGGAGAGGAGA CAGGCAACATCCGTGGCTCCATGAAGGTGCGGGTGCCCACAGAGCGCCTGGGCACCCGTGAGCGGCTCTA TGAATGGATTAGCATTGATAAGGATGACACAGGAGCCAAAAGCAAGGTTCCTTCAGTGTCAAGAGGCAGC CAGGAGCACAGATCTGGGAGCCGCAAGCCAGCTTCCACAGAGACCTCCTGTCCACTGTCCAAGTTGTTTG AAGAGCCTGAAAAGCCACCACCGACTGGCAGACCCCCGGCCCCACCACGGGCAGTTCCTAGGGAGGAGCC CTTGAACCCAAGGCTGAAGTCAGAAGGGACATCTGAGCAGGAAGGAGTAGCAGCCCCCCCACCCAAGAAC AGCTTCAATAACCCTGCCTACTACGTCCTTGAAGGGGTCCCACATCAGCTGCTGCCCCTGGAGCCACCCT CACTTGCCAGGGCCCCTCTCCCACCTGCCACCAAGAACAAAGTGGCCATCACAGTGCCTGCTCCTCAGCT TGGGCGCCACCGGACCCCTCGTGTGGGGGAGGGAAGCTCATCAGATGAGGACTCTGGGGGCACGCTGCCT CCTCCAGATTTCCCACCTCCACCACTGCCAGACTCAGCCATCTTCCTGCCCCCTAACCTGGATCCTTTGT CAATGCCAGTGGTCAGGGGCCGAAGTGGGGGTGAGGCCCGTGGCCCACCACCTCCCAAGGCCCATCCAAG ACCACCACTACCGCCAGGCACCTCACCTGCCAGTACTTTTTTGGGAGAGGTCGCAAGTGGGGATGACCGG TCTTGTTCGGTACTGCAAATGGCCAAAACACTCAGTGAGGTAGATTATGCTCCAGGGCCTGGACGCTCAG CACTCCTCCCCAACCCCTTGGAATTGCAGCCTCCCCGAGGGCCCTCGGACTATGGCCGGCCCCTCAGCTT CCCTCCACCCCGCATCCGGGAGAGCATCCAAGAAGACTTGGCAGAGGAGGCTCCGTGCCCGCAGGGCGGG CGGGCCAGCGGGCTGGGAGAGGCGGGCATGGGTGCCTGGCTGCGGGCCATCGGCTTGGAGCGCTATGAGG AGGGCCTGGTGCACAATGGCTGGGACGACCTGGAGTTTCTCAGTGACATCACTGAGGAAGACCTTGAGGA AGCTGGGGTGCAGGATCCTGCTCACAAGCGCCTTCTTCTGGACACCTTGCAGCTCAGCAAATGA
Translation (1257 aa): MASVCGTPSPGGALGSPAPAWYHRDLSRAAAEELLARAGRDGSFLVRDSESVAGAFALCVLYQKHVHTYR ILPDGEDFLAVQTSQGVPVRRFQTLGELIGLYAQPNQGLVCALLLPVEGEREPDPPDDRDASDVEDEKPP LPPRSGSTSISAPVGPSSPLPTPETPTTPAAESTPNGLSTVSHEYLKGSYGLDLEAVRGGASNLPHLTRT LVTSCRRLHSEVDKVLSGLEILSKVFDQQSSPMVTRLLQQQSLPQTGEQELESLVLKLSVLKDFLSGIQK KALKALQDMSSTAPPAPLQPSIRKAKTIPVQAFEVKLDVTLGDLTKIGKSQKFTLSVDVEGGRLVLLRRQ RDSQEDWTTFTHDRIRQLIKSQRVQNKLGVVFEKEKDRTQRKDFIFVSARKREAFCQLLQLMKNRHSKQD EPDMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKALDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGL KELTDLDYRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVN CHLTSGNEKTTRRNQNYLDILRLLSLGDRQLSAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRREFE PLLRVDQLNLEREKHKVFLRFSEEEISFPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPE THIICNSYGCTDDIVTSDHSPVFGTFEVGVTSQFISKKGLSKTSDQAYIEFESIEAIVKTASRTKFFIEF YSTCLEEYKKSFENDAQSSDNINFLKVQWSSRQLPTLKPILADIEYLQDQHLLLTVKSMDGYESYGECVV ALKSMIGSTAQQFLTFLSHRGEETGNIRGSMKVRVPTERLGTRERLYEWISIDKDDTGAKSKVPSVSRGS QEHRSGSRKPASTETSCPLSKLFEEPEKPPPTGRPPAPPRAVPREEPLNPRLKSEGTSEQEGVAAPPPKN SFNNPAYYVLEGVPHQLLPLEPPSLARAPLPPATKNKVAITVPAPQLGRHRTPRVGEGSSSDEDSGGTLP PPDFPPPPLPDSAIFLPPNLDPLSMPVVRGRSGGEARGPPPPKAHPRPPLPPGTSPASTFLGEVASGDDR SCSVLQMAKTLSEVDYAPGPGRSALLPNPLELQPPRGPSDYGRPLSFPPPRIRESIQEDLAEEAPCPQGG RASGLGEAGMGAWLRAIGLERYEEGLVHNGWDDLEFLSDITEEDLEEAGVQDPAHKRLLLDTLQLSK
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