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Report for CCDS21571.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
21571.1 |
Public |
Mus musculus |
7 |
Or52e19b |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:259073](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:21571.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:259073](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 21571.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000071844.1 |
ENSMUSP00000071744.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000071844.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000071744.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000071844](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000071744](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000218246.1 |
ENSMUSP00000151321.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000218246.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000151321.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000218246](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000151321](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_147070.2 |
NP_667281.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_147070.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_667281.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_147070](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_667281](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_667281.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 21571.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (939 nt): ATGCCCTCTAATAATGAAACTGCTTCACACCCCTCTCTCTTCCATCTGCTGGGCATTCCTGGGCTGGAAG CTTTCCATATCTGGATAGCCTTTCCTTTCTTTGTTGTTTATCCGATAGCACTTGTGGGGAATTTCACAAT CCTCTGTGTGATCAAGAATGAACAGAGTCTTCACCAGCCCATGTTCTACTTTCTTGCCCTCCTCTCTTTC ATTGATCTTGGCCTCTCTACTTCCACCATTCCCAAGATGCTGGGTATCTTCTGGTTCAACCTTAGGGAGA TAAGCTTTGAAGGCTGCCTCATCCAAATGTTCTTCATCCACACTTACACAGGCATGGAATCTGTTGTACT CCTGGCCATGGCAATTGACCGTTTTGTTGCCATCTGTTACCCACTTAGGTATACCTCTGTTCTCACCAAC AAAGTGGTGGCTGTCATGGCATCGGTTGTAATAGGGAGACCTGTCCTTCTTGTCATCCCTTTTTGTCCCC TCCTAAAACGCCTGCCCTTTTGTGGACACTATATTATTCCTCATACCTACTGTGAACATATGGGGATAGC ACGTCTAGCCTGTGCTAACATAAGGATAAACATCATCTATGGCTTATTCACCATTGCTGCTCTGATCTTT GATTTAATTCTCATTGCTTTCTCCTATGCTTGGATCCTACAGGCTGTTTTCCGCCTTCCTTCCAGGGATG CCAGACACAAAGCCCTTAGCACATGTGGTTCCCATGTCTGTGTCATCTTAGCCTTTTACACACCAGCATT TTTCTCTTTTATGACCCATAGGTTTGGTAGAAATGTTCCTCGTTATATTCACATCCTCTTGGCCAATCTC TATGTGGTTGTCCCTCCTTGTTTAAATCCAGTCATTTATGGAGTGAGGACAAAACAAATTAGGGAGGGAG TCTTAAAAATATTTGTAAAGAAAGAATAG
Translation (312 aa): MPSNNETASHPSLFHLLGIPGLEAFHIWIAFPFFVVYPIALVGNFTILCVIKNEQSLHQPMFYFLALLSF IDLGLSTSTIPKMLGIFWFNLREISFEGCLIQMFFIHTYTGMESVVLLAMAIDRFVAICYPLRYTSVLTN KVVAVMASVVIGRPVLLVIPFCPLLKRLPFCGHYIIPHTYCEHMGIARLACANIRINIIYGLFTIAALIF DLILIAFSYAWILQAVFRLPSRDARHKALSTCGSHVCVILAFYTPAFFSFMTHRFGRNVPRYIHILLANL YVVVPPCLNPVIYGVRTKQIREGVLKIFVKKE
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