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Report for CCDS21816.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21816.1 Public Mus musculus 7 Cacng3 23 108 98 CCDS HistoryNCBI Gene:54376Re-query CCDS DB by CCDS ID:21816.1Re-query CCDS DB by GeneID:54376See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21816.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084615.9 ENSMUSP00000081664.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084615.9Link to Ensembl Protein Viewer:ENSMUSP00000081664.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000084615Re-query CCDS DB by Protein ID:ENSMUSP00000081664
Original member Current member NCBI NM_019430.2 NP_062303.2 Accepted alive Link to Nucleotide Sequence:NM_019430.2Link to Protein Sequence:NP_062303.2Re-query CCDS DB by Nucleotide ID:NM_019430Re-query CCDS DB by Protein ID:NP_062303Link to BLAST:NP_062303.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062303.2 315 Q9JJV5 315 100% 0 0

Chromosomal Locations for CCDS 21816.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122671774 122671984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122754506 122754589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122762183 122762323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122768335 122768846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGAGGATGTGTGACAGAGGTATCCAGATGTTGATCACTACTGTAGGAGCCTTCGCAGCTTTTAGTTTAA
TGACCATTGCAGTGGGCACGGACTACTGGCTATATTCCAGAGGTGTGTGCAGGACTAAATCTACAAGTGA
CAATGAAACCAGCAGGAAGAATGAAGAAGTAATGACCCACTCCGGGTTGTGGAGGACCTGCTGCTTGGAA
GGAGCTTTCCGAGGCGTGTGCAAGAAAATCGATCACTTCCCAGAAGATGCAGACTATGAACAGGATACAG
CAGAATATCTTCTACGAGCTGTGAGGGCCTCCAGCGTCTTTCCCATCCTCAGCGTCACTCTGCTGTTTTT
CGGGGGACTCTGCGTGGCTGCCAGCGAGTTCCACCGCAGCAGGCACAGTGTGATCCTCAGCGCTGGCATC
TTCTTCGTCTCTGCAGGGCTAAGCAACATCATCGGCATCATAGTTTATATCTCAGCCAATGCTGGAGACC
CTGGGCAGAGGGACTCTAAAAAGAGCTACTCCTACGGCTGGTCCTTTTATTTTGGAGCCTTCTCTTTCAT
CATCGCGGAAATTGTGGGCGTGGTCGCCGTGCACATCTATATCGAGAAGCATCAGCAGTTGCGTGCCAGA
TCCCATTCAGAGCTCCTGAAGAAGTCTACATTTGCGCGCCTGCCGCCCTACAGGTATAGATTCCGAAGAC
GGTCAAGTTCTCGCTCCACTGAACCCAGATCTCGAGACCTTTCTCCCATCAGCAAAGGCTTCCACACCAT
CCCTTCCACCGACATCTCCATGTTCACCCTCTCCCGGGACCCCTCTAAGCTTACCATGGGGACCCTTCTC
AACTCTGACCGGGACCATGCTTTTCTACAGTTCCACAACTCCACACCCAAAGAGTTCAAAGAGTCATTGC
ATAACAATCCGGCCAACAGACGTACCACGCCTGTCTGA

Translation (315 aa):
MRMCDRGIQMLITTVGAFAAFSLMTIAVGTDYWLYSRGVCRTKSTSDNETSRKNEEVMTHSGLWRTCCLE
GAFRGVCKKIDHFPEDADYEQDTAEYLLRAVRASSVFPILSVTLLFFGGLCVAASEFHRSRHSVILSAGI
FFVSAGLSNIIGIIVYISANAGDPGQRDSKKSYSYGWSFYFGAFSFIIAEIVGVVAVHIYIEKHQQLRAR
SHSELLKKSTFARLPPYRYRFRRRSSSRSTEPRSRDLSPISKGFHTIPSTDISMFTLSRDPSKLTMGTLL
NSDRDHAFLQFHNSTPKEFKESLHNNPANRRTTPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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