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Report for CCDS2184.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2184.1 Public Homo sapiens 2 ARHGAP15 24 110 108 CCDS HistoryNCBI Gene:55843Re-query CCDS DB by CCDS ID:2184.1Re-query CCDS DB by GeneID:55843See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2184.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295095.11 ENSP00000295095.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295095.11Link to Ensembl Protein Viewer:ENSP00000295095.6Re-query CCDS DB by Nucleotide ID:ENST00000295095Re-query CCDS DB by Protein ID:ENSP00000295095
Original member Current member NCBI NM_018460.4 NP_060930.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018460.4Link to Protein Sequence:NP_060930.3Re-query CCDS DB by Nucleotide ID:NM_018460Re-query CCDS DB by Protein ID:NP_060930Link to BLAST:NP_060930.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060930.3 475 Q53QZ3 475 100% 0 0

Chromosomal Locations for CCDS 2184.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 143155491 143155655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143202134 143202202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143216384 143216445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143228581 143228668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143250511 143250600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143435601 143435699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143436913 143437042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143487373 143487495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143519266 143519364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143556408 143556485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143624133 143624267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143703419 143703524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 143767989 143768172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGCAGAAATCTACAAATTCTGATACTTCCGTGGAAACACTGAATTCTACCCGCCAAGGCACAGGAGCTG
TGCAAATGAGAATCAAAAATGCCAACAGCCACCATGACAGGCTCAGCCAAAGTAAATCCATGATCCTCAC
CGATGTCGGGAAGGTCACTGAACCTATATCCAGACACAGAAGGAATCATTCACAGCATATCTTGAAAGAT
GTCATTCCTCCATTGGAACAACTGATGGTTGAAAAAGAAGGTTATCTGCAAAAAGCTAAAATTGCAGATG
GAGGAAAGAAACTAAGGAAAAACTGGTCTACTTCCTGGATTGTTCTTTCTAGTCGAAGAATTGAATTTTA
CAAAGAATCCAAGCAACAGGCTCTGTCCAATATGAAAACTGGGCACAAACCAGAAAGTGTGGATTTGTGT
GGAGCACACATTGAATGGGCCAAGGAAAAATCGAGCAGAAAGAATGTCTTTCAGATCACAACAGTATCAG
GAAATGAGTTCCTTCTACAGTCAGATATTGACTTCATCATATTGGATTGGTTCCACGCTATCAAAAATGC
AATTGACAGATTGCCAAAGGATTCAAGTTGTCCATCAAGAAACCTGGAATTATTCAAAATCCAAAGATCC
TCTAGCACTGAATTGCTAAGTCACTACGACAGTGATATAAAAGAACAGAAACCAGAGCACAGAAAATCTT
TAATGTTCAGACTGCATCACAGTGCTTCCGATACAAGCGACAAAAATCGAGTTAAAAGCAGATTAAAGAA
GTTTATTACCCGAAGACCTTCCCTGAAAACTCTGCAAGAAAAAGGACTTATTAAAGATCAAATTTTTGGC
TCTCATCTGCACAAAGTGTGTGAACGTGAAAATTCCACAGTTCCGTGGTTTGTAAAGCAATGCATTGAAG
CTGTTGAGAAAAGAGGTCTAGATGTTGATGGAATATATCGAGTTAGTGGCAATCTGGCAACAATACAGAA
GTTAAGATTTATTGTCAACCAAGAAGAGAAGCTGAATTTGGACGACAGCCAGTGGGAGGACATCCACGTT
GTCACCGGAGCACTGAAGATGTTTTTCCGGGAGCTGCCTGAGCCGCTCTTCCCTTACAGTTTCTTTGAGC
AGTTTGTGGAAGCGATCAAAAAGCAAGACAACAACACAAGAATTGAAGCTGTAAAATCTCTTGTACAAAA
ACTCCCTCCGCCAAATCGTGACACCATGAAAGTCCTCTTTGGACATCTAACTAAGATAGTGGCCAAAGCC
TCCAAGAACCTCATGTCCACGCAAAGCTTGGGGATTGTATTTGGACCTACCCTTCTGCGAGCTGAAAATG
AAACAGGAAACATGGCGATCCACATGGTCTACCAGAACCAGATAGCTGAGCTCATGCTGAGTGAGTACAG
TAAGATCTTCGGCTCAGAGGAAGACTGA

Translation (475 aa):
MQKSTNSDTSVETLNSTRQGTGAVQMRIKNANSHHDRLSQSKSMILTDVGKVTEPISRHRRNHSQHILKD
VIPPLEQLMVEKEGYLQKAKIADGGKKLRKNWSTSWIVLSSRRIEFYKESKQQALSNMKTGHKPESVDLC
GAHIEWAKEKSSRKNVFQITTVSGNEFLLQSDIDFIILDWFHAIKNAIDRLPKDSSCPSRNLELFKIQRS
SSTELLSHYDSDIKEQKPEHRKSLMFRLHHSASDTSDKNRVKSRLKKFITRRPSLKTLQEKGLIKDQIFG
SHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWEDIHV
VTGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKA
SKNLMSTQSLGIVFGPTLLRAENETGNMAIHMVYQNQIAELMLSEYSKIFGSEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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