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Report for CCDS21874.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21874.1 Public Mus musculus 7 Bcl7c 23 108 98 CCDS HistoryNCBI Gene:12055Re-query CCDS DB by CCDS ID:21874.1Re-query CCDS DB by GeneID:12055See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21874.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061468.8 ENSMUSP00000057937.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061468.8Link to Ensembl Protein Viewer:ENSMUSP00000057937.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000061468Re-query CCDS DB by Protein ID:ENSMUSP00000057937
Original member Current member NCBI NM_009746.2 NP_033876.1 Accepted alive Link to Nucleotide Sequence:NM_009746.2Link to Protein Sequence:NP_033876.1Re-query CCDS DB by Nucleotide ID:NM_009746Re-query CCDS DB by Protein ID:NP_033876Link to BLAST:NP_033876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033876.1 217 O08664 217 100% 0 0

Chromosomal Locations for CCDS 21874.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127705050 127705175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127705727 127705812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127707176 127707337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127707433 127707541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127707880 127707958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127708436 127708527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGCCGGCCGGACCGTGCGGGCCGAGACCCGGAGCCGGGCCAAAGATGACATCAAGAAGGTGATGGCGA
CCATCGAGAAGGTCCGGAGATGGGAGAAGCGCTGGGTGACTGTGGGAGACACTTCCCTTCGAATCTTCAA
GTGGGTGCCTGTGGTGGATCCCCAGGAGGAGGAGAGGCGGCGGGCAGGAGGCGGGGCAGAGAGATCCCGT
GGCCGGGAGAGACGTGGTAGGGGCACCAGTCCCAGAGGGGGAGGCCCCCTCATCCTACTGGATCTCAATG
ATGAGAACAGCAACCAGAGTTTCCATTCTGAAGGTTCATTGCAAAAGGGTGCTGAGCCCAGCCCTGGGGG
GACGCCCCAGCCCAGCCGCCCTGGATCACCAACTGGACCCCCAGAAGTGATTACTGAAGATACTCAGCCC
CCACAATTGGGTCAGGAGAGAGATCCAGGGGGGACACCTGCAGGCGGTACTGATGAACCCCCAAAGCTGA
CCAAGGAGGAGCCTGTTCCAGAATTGCTAGAAGCTGAGGCCCCCGAAGCTTACCCTGTCTTTGAGCCAGT
GCCATCTGTCCCTGAGGCAGCCCAGGGTGACACAGAGGACTCGGAGGGCGCCCCCCCACTCAAGCGCATC
TGTCCAAATGCCCCTGACCCCTGA

Translation (217 aa):
MAGRTVRAETRSRAKDDIKKVMATIEKVRRWEKRWVTVGDTSLRIFKWVPVVDPQEEERRRAGGGAERSR
GRERRGRGTSPRGGGPLILLDLNDENSNQSFHSEGSLQKGAEPSPGGTPQPSRPGSPTGPPEVITEDTQP
PQLGQERDPGGTPAGGTDEPPKLTKEEPVPELLEAEAPEAYPVFEPVPSVPEAAQGDTEDSEGAPPLKRI
CPNAPDP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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