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Report for CCDS21895.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21895.1 Public Mus musculus 7 Rusf1 23 108 98 CCDS HistoryNCBI Gene:233913Re-query CCDS DB by CCDS ID:21895.1Re-query CCDS DB by GeneID:233913See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21895.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033044.15 ENSMUSP00000033044.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033044.15Link to Ensembl Protein Viewer:ENSMUSP00000033044.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000033044Re-query CCDS DB by Protein ID:ENSMUSP00000033044
Original member Current member NCBI NM_145590.2 NP_663565.2 Accepted alive Link to Nucleotide Sequence:NM_145590.2Link to Protein Sequence:NP_663565.2Re-query CCDS DB by Nucleotide ID:NM_145590Re-query CCDS DB by Protein ID:NP_663565Link to BLAST:NP_663565.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663565.2 466 Q91W34-1 466 99.3562% 0 3

Chromosomal Locations for CCDS 21895.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128272518 128272615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128273472 128273549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128273651 128273794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128274633 128274703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128276086 128276143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128276228 128276412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128276495 128276565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128285113 128285214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128288264 128288369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128288459 128288491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128290590 128290635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128297462 128297576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128297790 128298083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGGCTGACGCTGCGAGCCTACGGGCGCCGCTGTGCACGGAGCAGTTCGGCTCCGGAGCCCCGCGCGGCT
GCAGCGCTGCCGCCGATGGGAGCCTGCAGTGGGACGGGGCTCGGCGCTGGGGCTGGCTCTCCCGGGCCCC
GATAGCGAAACCTGGGCAGCACGCGGGTGGAGGCGGGGGACCCTGGGCAGCACTGACCGCTCTTTCGGGC
CTCAGATCCGTGCTGCTGCCTCAGGGCTTCCCAGATAGCGTCAGCCCGGATTACCTGCCATACCAGCTGT
GGGATTCCGTGCAGGCCTTTGCTTCCAGCCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGCAGGGCTT
AGGGGTAGGCAACGCAAAAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCGTGAAAGATTCAACTGGC
ATGTTGGGCCGTATCATCTTTGCCTGGTGGAAGGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGAGGC
TCTTTGCCGACATCCTCAACGATGTAGCCATGTTCCTAGAGATTATGGCTCCCATGTACCCAATCTTTTT
CACCATGACTGTCAGTACCAGCAACCTAGCCAAGTGCATTGTTGGTGTGGCTGGCGGGGCCACTCGAGCT
GCACTGACCATGCACCAGGCCCGAAGGAACAACATGGCAGACGTGTCAGCCAAGGACAGCAGTCAGGAGA
CAGTGGTGAACCTAGCAGGGCTACTGGTCAGCCTTTTGATGCTTCCTCTGGTATCAGATTGCCCAAGCCT
CAGCCTTGGCTGTTTCGTCCTGCTCACCGCCCTCCACATCTATGCCAACTACCGGGCAGTCCGAGCCCTT
GTCCTGGAGACCTTGAATGAAAGCCGCCTCCAGCTGGTCCTAGAGCACTTCCTGCAGAGGGGAGAGGTAC
TTGAACCTGCTTCAGCCAATCAGATGGAGCCACTGTGGACAGGTTTCTGGCCATCCCTGTCTCTGTCCCT
GGGTGTTCCCCTACACCACTTGGTCTCCAGTGTCTCTGAGCTGAAGCAGCTGGTTGAGGGCCATCACGAA
CCGTACCTCCTTTGCTGGAACAAGTCACGAAACCAGGTACGGGTTGCCCTGAGCCAAGAAGCAGGCCCCG
AGACTGTCTTAAGGGCTGCCACCCATGGGCTGATTCTCGGAGCCCTGCAGGAAGATGGGCCACTTCCGGG
AGAGCTGGCACAGCTGAGGCACCAGGTGCAGGCTGATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGAG
ACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCTGCTGGCTGGAAGACGG
AGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATG
A

Translation (466 aa):
MADAASLRAPLCTEQFGSGAPRGCSAAADGSLQWDGARRWGWLSRAPIAKPGQHAGGGGGPWAALTALSG
LRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTG
MLGRIIFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRA
ALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCPSLSLGCFVLLTALHIYANYRAVRAL
VLETLNESRLQLVLEHFLQRGEVLEPASANQMEPLWTGFWPSLSLSLGVPLHHLVSSVSELKQLVEGHHE
PYLLCWNKSRNQVRVALSQEAGPETVLRAATHGLILGALQEDGPLPGELAQLRHQVQADPKKESWILVRE
THQVLDTLFPKFLKGLQAAGWKTEKHHLEVDEWRATWPLSPEKKVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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