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Report for CCDS22221.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
22221.1 |
Public |
Mus musculus |
8 |
Tti2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:234138](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:22221.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:234138](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 8 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 22221.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000098842.2 |
ENSMUSP00000096441.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000098842.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000096441.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000098842](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000096441](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000209986.1 |
ENSMUSP00000147846.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000209986.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000147846.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000209986](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000147846](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000209851.1 |
ENSMUSP00000148056.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000209851.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000148056.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000209851](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000148056](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_144927.3 |
NP_659176.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_144927.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_659176.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_144927](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_659176](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_659176.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_659176.2 |
512 |
Q8BGV4 |
512 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 22221.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1539 nt): ATGAAGCTGGACAGTGCCGAAGAGAAGTCGGGGGTCGGCTGCTCCCTGCCTGCAGAGGGCTCTCCCCCGG CCCTCGAACCAGCCTTCTCCAAGATTCTGAACCGTCTCAGCCGCCCAAAGTCATCAGGACAGGGCGGCGC AAGAAATGCGGCTCTTAAAGACCTCGGCGCTTTAATAGAAGCCGCCGAAGGTGACAGATTCTTTGAGGGG AGTGGGAGTGGGGGATCCCTCCGGGGGATGCCCGAGATCCTGGGGCAGGTGGTGAGAGCCCTGGAGAAGT TCGCAGCACCCGAGGAGAAGGCAGATGGGGTCGAAGAGCATCCCGAAGTGCCCGAGAAGGCGACTGAAGT TGGCTCACTGTTTCTAAAGCTGTTGGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACTGCCCTGCGTGG AAGACAGGCCTCCGTCACATGTCAGGACCCGTGTATATTTTTGCCATCACTCACAGATTGAAGCAGCCAT GGACCAGTCCAGCATCTCAGCATGTTGCTGGTGAGGTGCTGTCTTTATTGCTTAGAGTTACTGAGTGCAG TTCTGTGGCAGGATTCCTATGCGGAGAAAATGAAGACGATCGAGGGAGATTTGCTGTGGTCTTGGGGCTT CTTAAGCCCCATTTGAATAAGGAAACCTGGAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGTGGACTC TCCAACAAGTCACTCAGCCCTGGCTGAATCAGCATCTAGAAAAGATACTTCCTCCGTCTTTGCTCATCTC AGATGACTATCAGACAGAGAATAAAATCCTGGGTGTCCAGTGCCTCCATCACATTGTGGTTACTGTGCCA GCTGCGGACTTGCTGCAGTATAACAGAGCCCAGGTCCTGTACCACGCCCTCTTCAATCACCTGTACATGC CTGAGCACCACCTCATTCAGGCTGTGCTCCTGTGCCTCCTAGACTTGTTCCCTGTCCTAGAGAAGGCTCT GCACTGGAAGGGAGACACAGCTCGAGTCACCACACACTGTCATGAAGTGTTACAGCTGATCCTCACGCAC ATGGAACCAGAGCACCGCCTCCTCCTACGGAGGACCTATGCCAGACACCTGCCAGCCTTCGTGAAGAGGT TGGGGATCCTAACTGTCCGGCACTTGAAGAGGCTGGAGCAAGTTATCCTTGGTTATCTGGAGGTTTATGA TGAACCAGAAGATGAAACTAGGTTGAAGATCCTGGAAACCCTGAAACTTGTCATGCAGTATACTTGGCCC AGAATTCCCTGCAGAGTTGTGGTCTTACTGAAGGCTCTCCTGAAACTCATATGTGATATATCGAGGGATA CGATCCCCACAACCGAGGCCGCTAAGAGTACAATGCTCCAGGAAGCCACAGACTGCCTGATTCTCCTGGA CCACTGTTCCCAGGGGCAGGTGAAGGGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGACAGCACAGTG GTGAGCTGCATCAGGAAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGATGACACTGAAGGTGACTAA
Translation (512 aa): MKLDSAEEKSGVGCSLPAEGSPPALEPAFSKILNRLSRPKSSGQGGARNAALKDLGALIEAAEGDRFFEG SGSGGSLRGMPEILGQVVRALEKFAAPEEKADGVEEHPEVPEKATEVGSLFLKLLGKVEAAKSSPDCPAW KTGLRHMSGPVYIFAITHRLKQPWTSPASQHVAGEVLSLLLRVTECSSVAGFLCGENEDDRGRFAVVLGL LKPHLNKETWKKNPAVKHVFSWTLQQVTQPWLNQHLEKILPPSLLISDDYQTENKILGVQCLHHIVVTVP AADLLQYNRAQVLYHALFNHLYMPEHHLIQAVLLCLLDLFPVLEKALHWKGDTARVTTHCHEVLQLILTH MEPEHRLLLRRTYARHLPAFVKRLGILTVRHLKRLEQVILGYLEVYDEPEDETRLKILETLKLVMQYTWP RIPCRVVVLLKALLKLICDISRDTIPTTEAAKSTMLQEATDCLILLDHCSQGQVKGLLAKIAVSCEDSTV VSCIRKVQQGSADSPGDDTEGD
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