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Report for CCDS22353.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22353.1 Public Mus musculus 8 Ndufa13 23 108 98 CCDS HistoryNCBI Gene:67184Re-query CCDS DB by CCDS ID:22353.1Re-query CCDS DB by GeneID:67184See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22353.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110167.4 ENSMUSP00000105796.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110167.4Link to Ensembl Protein Viewer:ENSMUSP00000105796.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000110167Re-query CCDS DB by Protein ID:ENSMUSP00000105796
Original member Current member NCBI NM_023312.3 NP_075801.1 Accepted alive Link to Nucleotide Sequence:NM_023312.3Link to Protein Sequence:NP_075801.1Re-query CCDS DB by Nucleotide ID:NM_023312Re-query CCDS DB by Protein ID:NP_075801Link to BLAST:NP_075801.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075801.1 144 Q9ERS2 144 100% 0 0

Chromosomal Locations for CCDS 22353.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 69894221 69894410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69894504 69894575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69895242 69895320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69901542 69901635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGGCGGCGTCGAAGGTGAAGCAGGACATGCCCCCGCCAGGGGGCTACGGCCCCATCGACTACAAGCGGA
ACCTGCCCCGCCGGGGACTGTCGGGGTACAGCATGTTTGCTGTGGGCATCGGGGCCTTGATCTTTGGCTA
CTGGAGAATGATGAGGTGGAACCAGGAGCGCAGGCGCCTGCTGATTGAGGACTTGGAGGCCAGGATCGCC
CTCATGCCGCTCTTCCAGGCAGAGAAGGACCGGAGGACCCTGCAGATTCTCCGGGAAAACCTGGAGGAGG
AAGCCATCATCATGAAGGATGTGCCCAACTGGAAGGTGGGCGAGTCTGTGTTCCATACCACACGATGGGT
GCCACCCCTCATTGGCGAGATGTATGGGTTGCGCACCAAGGAGGAGATGAGCAATGCCAACTTCGGCTTC
ACCTGGTACACTTAG

Translation (144 aa):
MAASKVKQDMPPPGGYGPIDYKRNLPRRGLSGYSMFAVGIGALIFGYWRMMRWNQERRRLLIEDLEARIA
LMPLFQAEKDRRTLQILRENLEEEAIIMKDVPNWKVGESVFHTTRWVPPLIGEMYGLRTKEEMSNANFGF
TWYT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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