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Report for CCDS22599.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22599.1 Public Mus musculus 8 Tmem208 23 108 98 CCDS HistoryNCBI Gene:66320Re-query CCDS DB by CCDS ID:22599.1Re-query CCDS DB by GeneID:66320See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22599.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000015000.11 ENSMUSP00000015000.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000015000.11Link to Ensembl Protein Viewer:ENSMUSP00000015000.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000015000Re-query CCDS DB by Protein ID:ENSMUSP00000015000
Original member NCBI NM_025486.2 NP_079762.1 Updated not alive Link to Nucleotide Sequence:NM_025486.2Link to Protein Sequence:NP_079762.1Re-query CCDS DB by Nucleotide ID:NM_025486Re-query CCDS DB by Protein ID:NP_079762
Current member NCBI NM_025486.3 NP_079762.1 Accepted alive Link to Nucleotide Sequence:NM_025486.3Link to Protein Sequence:NP_079762.1Re-query CCDS DB by Nucleotide ID:NM_025486Re-query CCDS DB by Protein ID:NP_079762Link to BLAST:NP_079762.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079762.1 173 Q9CR96-1 173 100% 0 0

Chromosomal Locations for CCDS 22599.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105326469 105326474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105327051 105327146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105328170 105328229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105328322 105328458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105328608 105328692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105328772 105328909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGGCGCCCAAAGGAAAAGTGGGTACCAGAGGGAAGAAACAGATATTTGAAGAGAACAAAGAAACTCTCA
AGTTTTACCTTCGGATCATACTGGGAGCCAACGCCATCTACTGCCTTGTAACCTTGGTCTTCTTCTATTC
CTCTGCCTCATTCTGGGCCTGGATGGCCCTGGGCTTTAGCTTGGCCGTGTACGGGGCCAGCTACCACTCT
ATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGATGGGTCCTTGATGGATGGTGGCATGGACCTCAACA
TGGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGATCCTACTGACAGCCATTGTTCAGGTGCTCAGCTG
TTTCTCCCTCTACATCTGGTCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTACCTTTTGTGGGTAAAC
GTGCTGGGCCCCTGGTTCACAGCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCC
GACAGGAGCGGCGGCAGATGAAAAGGTTATAG

Translation (173 aa):
MAPKGKVGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGASYHS
MSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFWLLAPGRALYLLWVN
VLGPWFTADSGAPAPELNEKRQRRQERRQMKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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