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Report for CCDS22629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22629.1 Public Mus musculus 8 Esrp2 23 108 98 CCDS HistoryNCBI Gene:77411Re-query CCDS DB by CCDS ID:22629.1Re-query CCDS DB by GeneID:77411See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22629.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115979.8 ENSMUSP00000111639.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115979.8Link to Ensembl Protein Viewer:ENSMUSP00000111639.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000115979Re-query CCDS DB by Protein ID:ENSMUSP00000111639
Original member Current member NCBI NM_176838.2 NP_789808.1 Accepted alive Link to Nucleotide Sequence:NM_176838.2Link to Protein Sequence:NP_789808.1Re-query CCDS DB by Nucleotide ID:NM_176838Re-query CCDS DB by Protein ID:NP_789808Link to BLAST:NP_789808.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789808.1 717 Q8K0G8 717 100% 0 0

Chromosomal Locations for CCDS 22629.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 106131494 106131583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106131664 106131829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106132106 106132292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106132405 106132603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106132695 106132907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106133009 106133310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106133451 106133493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106133573 106133705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106133779 106133889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106133960 106134014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106134234 106134332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106134610 106134724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106134823 106134936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106136357 106136485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106136570 106136767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2154 nt):
ATGACTCCGCCGCCGCCGCCGCCCCCACCCCCGGGCCCAGATCCCGCAGTAGACTCGGCCACAGACCCTT
GTCCCGAACCTCAGTCGCTGGTGGTTTTGTTCGGGGCCACTGCCGGTGCGCTGGGGCCGGACCTAGGCTC
GGACGAGACCGACTTAATCCTCCTAGTTTGGCAAGTGGTGGAGCCGCGCAGCCGACAGGTGGGGACGCTG
CACAAGTCGCTAGTTCGCGCCGAGGCGGCTGCCCTGAGTCCACAATGCCGCGAGGCGAGTGGACTCAGCG
CAGACAGCCTAGCGCGGGCGGAGTCCCTGGACAAAGTGCTGCAACAGTTCTCACAGCTGGTGAGCGGGGA
TGTGGCTCTGCTGGGCGGGGGCCCCTATGTGCTCTGCACTGATGGGCAGCAGCTGTTGCGACAGGTTCTG
CATCCTGAGGCCTCCAGGAAGAACCTGGTGCTCCCCGACACCTTCTTCTCCTTCTACGACCTCCGCAGAG
AATTCCATATGCAGCACCCAAGCACCTGCTCCGCCAGAGACCTCACAGTGGGCACCATGGCACAGGACTT
GGGACTAGAAACAGATGCTACCGAAGATGACTTTGGGGTCTGGGAAGTGAAGACTATGGTAGCTGTTATT
CTCCACCTACTTGAAGGGTCCAATGGTCAGTTGTTCTCGAAGCCAGAAGTGGTAAAGCAGAAATACGAGA
CAGGCCCTTGCAGCAAGGCTGATGTGGTGGACAATGAGACTGTAGTACGGGCCCGTGGGTTGCCCTGGCA
ATCATCAGACCAGGATGTGGCTCGATTCTTCAAAGGGCTCAACATTGCCAGGGGTGGTGTGGCCCTCTGT
CTCAACGCCCAGGGCCGCAGAAATGGCGAGGCCCTCATCCGATTCGTGGACAGCGAGCAGCGGGACCTAG
CGCTGCAGAGACACAAACACCACATGGGTGTCCGCTATATTGAGGTATATAAAGCCACAGGGGAGGAATT
CGTAAAGATTGCAGGGGGCACATCACTAGAGGTGGCCCGTTTCCTATCACGGGAAGATCAAGTGATCCTG
AGGCTACGGGGACTACCCTTTTCAGCCGGGCCAACAGATGTTCTAGGCTTCCTGGGGCCAGAATGCCCAG
TGACTGGGGGTGCTGATGGGCTGCTCTTTGTCCGCCACCCTGATGGCAGGCCTACTGGGGATGCCTTTGC
TCTCTTTGCCTGTGAGGAGCTGGCACAGGCTGCTCTGCGCAGGCACAAAGGCATGCTGGGTAAGCGATAC
ATTGAACTCTTCAGGAGCACGGCAGCCGAGGTGCAGCAGGTCCTTAACCGCTATGCAGCCAGTCCACTCC
TTCCCACACTGACTGCTCCACTGCTGCCCATTCCCTTTCCACTGGCAGGAGGAACTGGGAGGGACTGTGT
TCGCCTTAGAGGCCTGCCCTACACAGCCACCATTGAAGACATTCTGAGTTTTCTAGGAGAGGCAGCAGCT
GACATTCGGCCTCATGGTGTGCATATGGTGCTCAACCAACAGGGCCGGCCATCCGGTGACGCCTTCATCC
AGATGATGTCGGTGGAGCGTGCTCTGGCTGCTGCCCAGCGATGCCACAAGAAGATGATGAAAGAACGCTA
TGTGGAAGTAGTCCCTTGTTCCACAGAGGAGATGAGCCGTGTGCTGATGGGGGGTTCCCTGAGCCGCAGT
GGCCTGTCCCCTCCACCCTGCAAACTGCCCTGCCTCTCACCACCTACCTACGCCACCTTCCAGGCCACCC
CAGCCCTCATTCCCACAGAGACGACAGCACTATATCCCTCTTCTGCACTGCTGCCAGCTGCCAGGGTACC
CGCTGCTGCCACTCCTCTTGCCTATTACCCAGGGCCAGCCACTCAACTCTACATGAACTACACAGCCTAC
TATCCCAGCCCCCCAGTCTCCCCCACTACTGTGGGCTACCTCACCACACCTCCTACTGCCTTGGCCTCTA
CGCCCACCACAATGCTGTCCCAACCAGGAGCCCTGGTCCGAATGCAGGGGGTGCCATACACAGCTGGTAT
GAAGGACCTACTCAGTGTCTTTCAAGCCTACCAGCTGGCTCCTGATGACTACACCACTCTGATGCCTGTT
GGTGACCCACCTCGCACTGTGTTACAAGCCCCTAAGGAGTGGGTGTGTTTGTAG

Translation (717 aa):
MTPPPPPPPPPGPDPAVDSATDPCPEPQSLVVLFGATAGALGPDLGSDETDLILLVWQVVEPRSRQVGTL
HKSLVRAEAAALSPQCREASGLSADSLARAESLDKVLQQFSQLVSGDVALLGGGPYVLCTDGQQLLRQVL
HPEASRKNLVLPDTFFSFYDLRREFHMQHPSTCSARDLTVGTMAQDLGLETDATEDDFGVWEVKTMVAVI
LHLLEGSNGQLFSKPEVVKQKYETGPCSKADVVDNETVVRARGLPWQSSDQDVARFFKGLNIARGGVALC
LNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGTSLEVARFLSREDQVIL
RLRGLPFSAGPTDVLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRY
IELFRSTAAEVQQVLNRYAASPLLPTLTAPLLPIPFPLAGGTGRDCVRLRGLPYTATIEDILSFLGEAAA
DIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMMKERYVEVVPCSTEEMSRVLMGGSLSRS
GLSPPPCKLPCLSPPTYATFQATPALIPTETTALYPSSALLPAARVPAAATPLAYYPGPATQLYMNYTAY
YPSPPVSPTTVGYLTTPPTALASTPTTMLSQPGALVRMQGVPYTAGMKDLLSVFQAYQLAPDDYTTLMPV
GDPPRTVLQAPKEWVCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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