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Report for CCDS23203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23203.1 Public Mus musculus 9 Tmem266 23 108 98 CCDS HistoryNCBI Gene:244886Re-query CCDS DB by CCDS ID:23203.1Re-query CCDS DB by GeneID:244886See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034862.4 ENSMUSP00000034862.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034862.4Link to Ensembl Protein Viewer:ENSMUSP00000034862.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000034862Re-query CCDS DB by Protein ID:ENSMUSP00000034862
Original member NCBI NM_172923.4 NP_766511.1 Updated not alive Link to Nucleotide Sequence:NM_172923.4Link to Protein Sequence:NP_766511.1Re-query CCDS DB by Nucleotide ID:NM_172923Re-query CCDS DB by Protein ID:NP_766511
Current member NCBI NM_172923.5 NP_766511.1 Accepted alive Link to Nucleotide Sequence:NM_172923.5Link to Protein Sequence:NP_766511.1Re-query CCDS DB by Nucleotide ID:NM_172923Re-query CCDS DB by Protein ID:NP_766511Link to BLAST:NP_766511.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766511.1 538 Q8BZB3-1 538 100% 0 0

Chromosomal Locations for CCDS 23203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 55377576 55377613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55380679 55380867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55397741 55397895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55400574 55400647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55413864 55413920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55414940 55415078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55418008 55418123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55430275 55430464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55435191 55435253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55437107 55437702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGGCTTTGGTTACATCTTTCAACATGGCCAATCCACAACCTGCCATTGAAGGAGGAATTTCTGAAGTTG
AGATTATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCGGTGCAGCTGGTGAACTTTGCCTA
TCGGGACCTGCCCCTGGCTGCCGTAGACCTCTCCACAGGGGGCTCACAGCTCCTGTCGAATTTGGACGAA
GAGTACCAAAGAGAAGGGTCTGACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTAT
TTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTGGTGGTGATCCTCCTGACTCT
GGAGCTTCTCATAGATACAAAGCTTCTCCAGTTTTCCAATGCTTTCCAGTTTGCTGGTGTCATTCACTGG
ATCAGTCTGGTCATTCTCTCTGTGTTCTTCTCAGAGACTGTCCTACGGATCGTGGTACTGGGGATCTGGG
ATTACATCGAAAACAAAATAGAGGTGTTTGACGGGGCTGTGATCATCCTGTCCTTGGCCCCGATGGTGGC
GTCCACTGTGGCTAACGGACCCAGGAGCCCCTGGGATGCCATCAGCCTCATCATCATGTTCCGAATCTGG
CGGGTGAAGAGGGTCATTGATGCCTATGTCCTGCCAGTCAAGTTGGAGATGGAGATGGTCACCCAGCAGT
ATGAGAAGGCCAAGGCCATCCAAGATGAGCAGCTGGAAAGACTGACGCAAATCTGTCAGGAGCAAGGGTT
TGAGATCCGGCAGCTGCGTGCGCACCTGGCACAGCAGGACCTGGATCTGGCAGCCGAGCGGGAGGCGGCG
CTGCAGGCCCCACACGTGCTCAGCCAGCCACGCAGCCGCTACAAGGTCGTAGAGGCTGGCACGTGGGCCG
AGGAGACAGCAGCCGAGAGCATCGTGGAAGAGCTGAGGCCCTCTCAAGAAGCCACAGTGAAAGATGACAT
GAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGACAGTGGAGCCCCAGAACCAGCAGTATGT
GTGGTCACTACAGCTGCCATAGACATCCACCAGCCCAATGTCCCCTCAGACCTCTTCTCAGTCGACCTGC
CTCTGAAGCTCAGTGGCAACAGCACCTGCGCCAGCGCCACCTCGGAGACCACCTCCCACTCTACCTGTGG
CTCAGTCACCAGGGCCCAGAGTGCCAGCAGCCAGACACTGGGTTCCTCCACAGACTGTAGCACCCCCCGG
GAAGAGCTGCTGCCCTCTAAGCCCAGATCTTCTCCCCTGCCACTGCTTCTGCCCCCTCAGCAGCTGGTGG
CAGAGGCCACAGTCCAGGACCTGATGTCCTCTCTGTCAAAGGACCCCTGCCCATCCCATAAGGCCTTGGA
CCCAGCACCCCTGGCCCAGCCTACCCCACTGGGCTCAGTCCAGACCAGCCCTGAGCTGGAGCATAGGGTG
AGTCTGTTCAACCAGAAGAACCAGGAGGCTCTCCCTGTTCTTCAGATCAACCCTGTCATCCACTTGCAGC
CCACAGCGGGGCTGGAGGAGAAGTTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTCCTGA
GGCCTAG

Translation (538 aa):
MALVTSFNMANPQPAIEGGISEVEIISQQVDEETKSIAPVQLVNFAYRDLPLAAVDLSTGGSQLLSNLDE
EYQREGSDWLKPCCGKRAAVWQVFLLSASLNSFLVACVILVVILLTLELLIDTKLLQFSNAFQFAGVIHW
ISLVILSVFFSETVLRIVVLGIWDYIENKIEVFDGAVIILSLAPMVASTVANGPRSPWDAISLIIMFRIW
RVKRVIDAYVLPVKLEMEMVTQQYEKAKAIQDEQLERLTQICQEQGFEIRQLRAHLAQQDLDLAAEREAA
LQAPHVLSQPRSRYKVVEAGTWAEETAAESIVEELRPSQEATVKDDMNSYISQYYNGPSSDSGAPEPAVC
VVTTAAIDIHQPNVPSDLFSVDLPLKLSGNSTCASATSETTSHSTCGSVTRAQSASSQTLGSSTDCSTPR
EELLPSKPRSSPLPLLLPPQQLVAEATVQDLMSSLSKDPCPSHKALDPAPLAQPTPLGSVQTSPELEHRV
SLFNQKNQEALPVLQINPVIHLQPTAGLEEKFRSLESKEPKLHTVPEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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