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Report for CCDS23303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23303.1 Public Mus musculus 9 Dapk2 23 108 98 CCDS HistoryNCBI Gene:13143Re-query CCDS DB by CCDS ID:23303.1Re-query CCDS DB by GeneID:13143See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23303.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034944.8 ENSMUSP00000034944.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034944.8Link to Ensembl Protein Viewer:ENSMUSP00000034944.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000034944Re-query CCDS DB by Protein ID:ENSMUSP00000034944
Original member NCBI NM_010019.3 NP_034149.2 Updated not alive Link to Nucleotide Sequence:NM_010019.3Link to Protein Sequence:NP_034149.2Re-query CCDS DB by Nucleotide ID:NM_010019Re-query CCDS DB by Protein ID:NP_034149
Current member NCBI NM_010019.4 NP_034149.2 Accepted alive Link to Nucleotide Sequence:NM_010019.4Link to Protein Sequence:NP_034149.2Re-query CCDS DB by Nucleotide ID:NM_010019Re-query CCDS DB by Protein ID:NP_034149Link to BLAST:NP_034149.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034149.2 370 Q8VDF3-1 370 100% 0 0

Chromosomal Locations for CCDS 23303.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 66165344 66165435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66220534 66220755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66231713 66231851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66246417 66246546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66250337 66250385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66251075 66251101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66254471 66254623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66255331 66255376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66268679 66268768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66268867 66268950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 66271627 66271707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGGTCCAGGCCTCGATGAGGAGCCCAAATATGGAGACGTTCAAACAGCAGAAGGTGGAGGACTTTTATG
ATATTGGAGAGGAGCTGGGCAGTGGCCAGTTTGCCATCGTGAAGAAGTGCCGGGAGAAGAGCACGGGGCT
GGAGTATGCAGCCAAGTTCATTAAGAAGAGGCAGAGCCGGGCCAGCCGTCGGGGCGTGTGCCGGGAGGAA
ATCGAGCGGGAGGTGAGCATCCTGCGGCAGGTGCTGCACCCCAACATCATCACGCTGCACGACGTCTATG
AGAACCGCACCGACGTGGTGCTCATCCTTGAGCTAGTGTCCGGAGGAGAACTGTTTGATTTCCTGGCCCA
GAAGGAGTCGTTAAGTGAGGAGGAAGCCACCAGCTTCATTAAGCAGATCCTGGATGGGGTGAATTACCTT
CACACAAAGAAAATTGCTCACTTTGATCTCAAGCCAGAAAACATCATGTTGTTAGACAAGAATATCCCAA
TTCCACACATCAAGCTGATTGACTTTGGCCTGGCTCACGAAATAGAAGATGGAGTTGAATTTAAAAACAT
TTTTGGGACACCTGAATTTGTTGCTCCAGAAATCGTGAACTATGAGCCACTGGGACTGGAGGCCGACATG
TGGAGCATTGGAGTCATCACCTATATCCTTCTAAGTGGAGCGTCCCCCTTCCTGGGAGACACAAAACAAG
AAACCCTGGCAAATATCACTGCTGTGAGTTACGACTTTGATGAGGAATTCTTCAGCCAGACAAGCGAGCT
GGCCAAGGACTTCATTCGGAAGCTTCTTGTGAAAGAGACCCGGAAACGGCTTACCATCCAAGAGGCTCTC
AGACATCCCTGGATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGAGAGTCCGTGGTCAACCTGG
AGAATTTTAAGAAGCAGTATGTCCGCAGGCGGTGGAAGCTGTCCTTCAGCATCGTCTCCTTGTGCAACCA
CCTCACTCGCTCCCTGATGAAGAAGGTACATCTGAGGACAAGCGAGGACCTGAGGAACTGCGAGAGTGAC
ACAGAGGAGAACATCGCCAGGAGGAAAGCCCTTCACCCCCGGAGGAGGAGCAGTACCTCCTAA

Translation (370 aa):
MVQASMRSPNMETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE
IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL
HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADM
WSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL
RHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESD
TEENIARRKALHPRRRSSTS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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