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Report for CCDS2346.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2346.1 Public Homo sapiens 2 FLACC1 24 110 108 CCDS HistoryNCBI Gene:130540Re-query CCDS DB by CCDS ID:2346.1Re-query CCDS DB by GeneID:130540See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2346.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286190.9 ENSP00000286190.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000286190.9Link to Ensembl Protein Viewer:ENSP00000286190.5Re-query CCDS DB by Nucleotide ID:ENST00000286190Re-query CCDS DB by Protein ID:ENSP00000286190
Original member Current member EBI ENST00000405148.6 ENSP00000385098.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405148.6Link to Ensembl Protein Viewer:ENSP00000385098.2Re-query CCDS DB by Nucleotide ID:ENST00000405148Re-query CCDS DB by Protein ID:ENSP00000385098
Original member Current member NCBI NM_139163.4 NP_631902.2 Accepted alive Link to Nucleotide Sequence:NM_139163.4Link to Protein Sequence:NP_631902.2Re-query CCDS DB by Nucleotide ID:NM_139163Re-query CCDS DB by Protein ID:NP_631902Link to BLAST:NP_631902.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_631902.2 445 Q96Q35-1 445 100% 0 0

Chromosomal Locations for CCDS 2346.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 201288655 201288781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201289457 201289566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201289696 201289854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201299238 201299300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201307519 201307622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201309151 201309250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201330470 201330522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201330736 201330833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201342370 201342431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201344170 201344263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201346542 201346675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201348254 201348302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201350711 201350782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201351292 201351404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGTACCCCAACCCTCTCATCTACTGCACCTGCTGGGACCCCTGGAACTTGGGACCACGGAAGCTAATCA
AGACCCCTCAACTACCACGCAAGAACTCCACAGGGAGTTCCAAGCTAACTCCTCTTGTACCAGCTCCAAA
AAATCACAATTACCTCCAACCAACAAAACCTGTTGTTTCCCCAAAAATGAAAATCCATTCAGCAAGGCAA
GAAGAGACTAATAAATCATTTTATGAAGTGATCAACGTGTCACCTGGCTATCAACTTGTTCGGAATCGGG
AACAGATTTCTGTCACCTTAGGGGATGAGATGTTTGATAGGAAAAAGCGGTGGGAATCGGAGATCCCGGA
CAAAGGCAGATTTTCCAGGACCAACATCATTTCTGACCTAGAAGAGCAAATCTCAGAGCTGACAGCAATA
ATTGAACAAATGAACAGAGACCACCAGTCTGCCCAGAAATTGCTCTCCAGTGAAATGGATCTCCGCTGTG
CTGAGATGAAACAGAACTTTGAAAACAAGAACAGGGAGCTCAAAGAGGCCCATGAAGCAGAACTCAGTGA
GTTGGAGAACAACTACAAAGCAGCCTTGAAGGCAGAGAAGTTGGCTGCCCAAGAGAAGCTAGAGGAGATG
GGAAAAGAATACAAGTATTTGAAGAATATGTTTCGTACGTATCAGGACAGTATTTATGATGAAATGGAAG
AGAAGTGGTCAAAACAGAAGGCGAAATGGAAGAAGGATGAGAAGTTCGAGCGAGAAAATATCCTGCTACA
GCAAAAAAAAAAGATGACCAAAAAATTCGAAATGGAGTCAGGAGAAGAAGATAAGAAAATAAATGAATCC
TGCAGTGCTGTCTTTGAGAACTTCATTCAAGAGAAGGAGGAGCTCTTGAAACAACATCAAAGTGACACCT
TGCAATTAGAAGAGCTGAGAAAAACCAAAGAGGTGCCCTGGAGAAGAGACCAAATAAATAGACATTGGCA
TGATGTCCTGCAACAGCTTCTTCTTATGCAGGTCATGCAGGAAGAATTGCATGCACAAGCCCTTATCCTA
GAGTCACTGAACACAAACCTCTACTATACCCAGTTGGAACTCCAGAAAGAGAAAGCTATAGTGGGAAATC
TGGAGAAAATGCTTCAAACCAAGTTTGCTGAAACTGAAGAAAAGTATAAGCACACCATACAGATCCTGAC
GGAAGAGAACATTCATCTGAAGCAAAAGATAATTTCTAAGAATGAAGAAATTTGTGAAGGATGTTCTGGG
AGATTGGCCTCTATTACTGTTTCTAAGGATGATTCTGACACTGTGCAAGATGGTAGCAAGAAAGGACAAG
AATCATAA

Translation (445 aa):
MYPNPLIYCTCWDPWNLGPRKLIKTPQLPRKNSTGSSKLTPLVPAPKNHNYLQPTKPVVSPKMKIHSARQ
EETNKSFYEVINVSPGYQLVRNREQISVTLGDEMFDRKKRWESEIPDKGRFSRTNIISDLEEQISELTAI
IEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAHEAELSELENNYKAALKAEKLAAQEKLEEM
GKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKDEKFERENILLQQKKKMTKKFEMESGEEDKKINES
CSAVFENFIQEKEELLKQHQSDTLQLEELRKTKEVPWRRDQINRHWHDVLQQLLLMQVMQEELHAQALIL
ESLNTNLYYTQLELQKEKAIVGNLEKMLQTKFAETEEKYKHTIQILTEENIHLKQKIISKNEEICEGCSG
RLASITVSKDDSDTVQDGSKKGQES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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