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Report for CCDS2347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2347.1 Public Homo sapiens 2 TRAK2 24 110 108 CCDS HistoryNCBI Gene:66008Re-query CCDS DB by CCDS ID:2347.1Re-query CCDS DB by GeneID:66008See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2347.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332624.8 ENSP00000328875.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332624.8Link to Ensembl Protein Viewer:ENSP00000328875.3Re-query CCDS DB by Nucleotide ID:ENST00000332624Re-query CCDS DB by Protein ID:ENSP00000328875
Original member Current member NCBI NM_015049.3 NP_055864.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015049.3Link to Protein Sequence:NP_055864.2Re-query CCDS DB by Nucleotide ID:NM_015049Re-query CCDS DB by Protein ID:NP_055864Link to BLAST:NP_055864.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055864.2 914 O60296-1 914 100% 0 0

Chromosomal Locations for CCDS 2347.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 201380543 201381218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201384111 201384216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201386218 201386484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201387703 201388001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201389300 201389503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201389801 201389880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201392909 201393046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201394798 201394872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201395314 201395444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201397502 201397580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201398145 201398354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201399377 201399493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201401018 201401094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201407403 201407597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201420417 201420507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2745 nt):
ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACA
GAGACTCGGAGAGCATCACTGATGTCTGCTCCAATGAGGATCTCCCTGAAGTTGAGCTGGTGAGTCTGCT
AGAAGAACAACTACCACAGTATAGGCTAAAAGTAGACACTCTCTTTCTATATGAAAATCAAGACTGGACT
CAGTCTCCACACCAGCGGCAGCATGCATCTGATGCTCTCTCTCCAGTCCTTGCTGAAGAGACTTTCCGTT
ACATGATTCTAGGCACAGACAGGGTGGAGCAGATGACCAAAACTTACAATGACATCGACATGGTTACACA
TCTCCTGGCAGAGAGGGATCGTGATCTGGAACTCGCTGCTCGAATTGGACAAGCTCTCTTAAAGCGGAAC
CATGTCTTATCTGAGCAGAACGAATCCCTGGAGGAGCAATTGGGACAAGCCTTTGATCAAGTTAATCAGC
TGCAGCATGAGCTATGCAAGAAAGATGAGTTACTTCGAATCGTCTCCATTGCTTCTGAAGAAAGTGAAAC
TGATTCCAGCTGTTCTACACCTCTTCGGTTCAATGAGTCCTTTAGCTTATCTCAAGGGTTGCTGCAGTTG
GAAATGCTGCAAGAAAAGCTCAAGGAACTGGAAGAAGAGAATATGGCTCTTCGATCCAAGGCTTGTCACA
TAAAGACAGAAACTGTTACCTATGAAGAAAAGGAACAACAGCTTGTCAGCGACTGTGTTAAAGAACTTCG
TGAAACAAATGCTCAGATGTCCAGAATGACTGAAGAATTGTCAGGGAAGAGTGATGAGCTGATTCGATAC
CAAGAAGAGCTTTCCTCTCTTTTGTCACAGATTGTAGACCTTCAGCACAAACTTAAAGAACATGTGATTG
AGAAGGAAGAACTAAAACTTCACCTGCAAGCTTCCAAAGATGCCCAACGGCAACTGACAATGGAGCTGCA
CGAGTTACAAGACAGGAATATGGAGTGTCTAGGAATGTTACATGAATCCCAAGAAGAAATAAAGGAACTT
CGTAGTAGATCTGGCCCTACTGCTCATCTCTACTTCTCCCAATCATATGGAGCTTTTACTGGGGAATCTT
TGGCAGCTGAGATTGAGGGGACTATGCGTAAAAAGCTGAGTTTGGATGAGGAATCTTCTCTCTTTAAACA
AAAAGCCCAACAGAAGCGGGTATTTGATACCGTCAGGATTGCCAATGACACACGGGGCCGCTCTATCTCA
TTCCCAGCTCTGTTACCCATTCCAGGCTCCAACCGTTCAAGTGTCATCATGACAGCAAAACCTTTTGAGT
CTGGTCTTCAGCAAACAGAGGACAAATCACTCCTGAACCAGGGGAGCAGCTCAGAGGAGGTTGCAGGGAG
CTCCCAGAAGATGGGCCAACCAGGACCCTCAGGAGATAGTGATTTGGCTACAGCACTGCATCGCCTTAGC
TTGCGTCGACAAAACTATTTAAGTGAGAAGCAGTTCTTTGCTGAAGAATGGCAGCGGAAGATCCAGGTTC
TGGCAGACCAGAAGGAAGGAGTTAGTGGCTGTGTCACCCCGACAGAGAGCCTTGCCTCTCTCTGCACCAC
CCAGTCAGAGATCACAGACCTCAGCAGTGCCAGTTGCCTTCGAGGTTTTATGCCAGAAAAATTACAAATT
GTCAAGCCCCTTGAAGGATCACAAACTCTGTATCACTGGCAGCAGCTTGCTCAACCAAACTTGGGAACCA
TCCTTGATCCACGACCAGGTGTCATTACTAAAGGCTTTACCCAGTTGCCCGGGGATGCTATTTATCACAT
CTCAGATTTAGAAGAGGATGAAGAGGAGGGTATTACTTTTCAGGTTCAGCAACCTCTTGAAGTGGAAGAG
AAACTTTCAACATCCAAGCCAGTAACAGGGATCTTCCTGCCACCCATTACTTCAGCAGGTGGACCAGTTA
CAGTTGCAACCGCCAACCCAGGAAAGTGCCTGTCGTGCACAAACTCAACATTCACTTTCACCACCTGTAG
AATATTACATCCCTCTGACATCACTCAGGTTACCCCCAGCTCTGGGTTCCCTTCATTATCCTGTGGAAGT
AGCGGTAGCAGTTCATCCAACACGGCTGTGAATTCTCCTGCCTTGTCCTATAGACTCAGCATTGGTGAGT
CCATCACCAACCGACGAGATTCCACTACAACCTTCAGTAGCACCATGAGCTTGGCCAAACTTCTACAAGA
GCGAGGCATCTCTGCCAAAGTGTACCACAGCCCAATTTCAGAGAACCCCCTCCAGCCTCTCCCTAAATCC
CTGGCTATCCCTTCCACACCACCAAATTCACCATCTCACTCACCTTGCCCTTCTCCTTTACCCTTTGAGC
CTCGAGTGCATCTCTCTGAAAATTTTTTGGCCTCTCGACCAGCTGAGACATTCCTCCAGGAGATGTATGG
CTTGAGACCCTCCCGGAACCCTCCTGATGTTGGCCAGTTGAAGATGAACTTAGTGGACAGGCTGAAGAGA
CTGGGGATAGCCAGAGTGGTCAAGAACCCTGGTGCCCAAGAGAATGGAAGATGCCAGGAGGCAGAAATTG
GTCCTCAAAAACCAGATTCTGCTGTTTATTTAAATTCAGGTAGCAGTTTATTAGGTGGACTAAGGAGGAA
TCAGAGTCTTCCAGTCATAATGGGTAGCTTTGCTGCCCCAGTTTGCACATCCTCACCCAAAATGGGTGTC
CTGAAGGAGGACTGA

Translation (914 aa):
MSQSQNAIFTSPTGEENLMNSNHRDSESITDVCSNEDLPEVELVSLLEEQLPQYRLKVDTLFLYENQDWT
QSPHQRQHASDALSPVLAEETFRYMILGTDRVEQMTKTYNDIDMVTHLLAERDRDLELAARIGQALLKRN
HVLSEQNESLEEQLGQAFDQVNQLQHELCKKDELLRIVSIASEESETDSSCSTPLRFNESFSLSQGLLQL
EMLQEKLKELEEENMALRSKACHIKTETVTYEEKEQQLVSDCVKELRETNAQMSRMTEELSGKSDELIRY
QEELSSLLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNMECLGMLHESQEEIKEL
RSRSGPTAHLYFSQSYGAFTGESLAAEIEGTMRKKLSLDEESSLFKQKAQQKRVFDTVRIANDTRGRSIS
FPALLPIPGSNRSSVIMTAKPFESGLQQTEDKSLLNQGSSSEEVAGSSQKMGQPGPSGDSDLATALHRLS
LRRQNYLSEKQFFAEEWQRKIQVLADQKEGVSGCVTPTESLASLCTTQSEITDLSSASCLRGFMPEKLQI
VKPLEGSQTLYHWQQLAQPNLGTILDPRPGVITKGFTQLPGDAIYHISDLEEDEEEGITFQVQQPLEVEE
KLSTSKPVTGIFLPPITSAGGPVTVATANPGKCLSCTNSTFTFTTCRILHPSDITQVTPSSGFPSLSCGS
SGSSSSNTAVNSPALSYRLSIGESITNRRDSTTTFSSTMSLAKLLQERGISAKVYHSPISENPLQPLPKS
LAIPSTPPNSPSHSPCPSPLPFEPRVHLSENFLASRPAETFLQEMYGLRPSRNPPDVGQLKMNLVDRLKR
LGIARVVKNPGAQENGRCQEAEIGPQKPDSAVYLNSGSSLLGGLRRNQSLPVIMGSFAAPVCTSSPKMGV
LKED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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