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Report for CCDS23632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23632.1 Public Mus musculus 9 Lyzl4 23 108 98 CCDS HistoryNCBI Gene:69032Re-query CCDS DB by CCDS ID:23632.1Re-query CCDS DB by GeneID:69032See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23632.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077706.9 ENSMUSP00000076887.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077706.9Link to Ensembl Protein Viewer:ENSMUSP00000076887.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000077706Re-query CCDS DB by Protein ID:ENSMUSP00000076887
Original member Current member EBI ENSMUST00000120918.7 ENSMUSP00000113034.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120918.7Link to Ensembl Protein Viewer:ENSMUSP00000113034.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120918Re-query CCDS DB by Protein ID:ENSMUSP00000113034
Original member NCBI NM_026915.3 NP_081191.1 Updated not alive Link to Nucleotide Sequence:NM_026915.3Link to Protein Sequence:NP_081191.1Re-query CCDS DB by Nucleotide ID:NM_026915Re-query CCDS DB by Protein ID:NP_081191
Current member NCBI NM_026915.4 NP_081191.1 Accepted alive Link to Nucleotide Sequence:NM_026915.4Link to Protein Sequence:NP_081191.1Re-query CCDS DB by Nucleotide ID:NM_026915Re-query CCDS DB by Protein ID:NP_081191Link to BLAST:NP_081191.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081191.1 145 Q9D925 145 100% 0 0

Chromosomal Locations for CCDS 23632.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 121578025 121578094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121582981 121583059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121584072 121584221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121584334 121584472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGCAGCTGTACCTGGTGCTTCTCCTCATCAGCTACTTGCTGACTCCGATCGGTGCTTCCATCTTGGGGC
GCTGCACAGTGGCTAAGATGCTCTATGATGGGGGCTTGAATTATTTTGAGGGCTACAGCCTTGAAAACTG
GGTGTGCCTGGCTTATTTTGAGAGCAAGTTCAACCCCTCAGCTGTCTATGAGGACCCACAAGATGGCTCC
ACCGGTTTCGGCCTCTTTCAGATTCGTGACAATGAATGGTGCGGCCACGGCAAGAACCTCTGCAGTGTGT
CCTGCACTGCTTTACTGAATCCAAACTTAAAGGATACGATCCAGTGTGCCAAGAAAATCGTGAAAGGAAA
ACATGGGATGGGAGCGTGGCCCATCTGGTCCAAGAACTGCCAGCTGTCTGACGTTCTGGACCGGTGGCTG
GACGGCTGTGATCTGTAG

Translation (145 aa):
MQLYLVLLLISYLLTPIGASILGRCTVAKMLYDGGLNYFEGYSLENWVCLAYFESKFNPSAVYEDPQDGS
TGFGLFQIRDNEWCGHGKNLCSVSCTALLNPNLKDTIQCAKKIVKGKHGMGAWPIWSKNCQLSDVLDRWL
DGCDL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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