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Report for CCDS23935.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23935.1 Public Mus musculus 10 Derl3 23 108 98 CCDS HistoryNCBI Gene:70377Re-query CCDS DB by CCDS ID:23935.1Re-query CCDS DB by GeneID:70377See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23935.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000009236.5 ENSMUSP00000009236.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000009236.5Link to Ensembl Protein Viewer:ENSMUSP00000009236.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000009236Re-query CCDS DB by Protein ID:ENSMUSP00000009236
Original member Current member NCBI NM_024440.2 NP_077760.1 Accepted alive Link to Nucleotide Sequence:NM_024440.2Link to Protein Sequence:NP_077760.1Re-query CCDS DB by Nucleotide ID:NM_024440Re-query CCDS DB by Protein ID:NP_077760Link to BLAST:NP_077760.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077760.1 228 Q9D8K3-1 228 100% 0 0

Chromosomal Locations for CCDS 23935.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75893425 75893517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75893619 75893684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75893770 75893843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75893967 75894060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75894432 75894627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75895039 75895129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75895247 75895319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGGCTGGGCAGAGGCTGGCGGCGGGCTTCCTGCAGGTGCCCGCGGTGACACGCGCCTACACCGCGGCCT
GCGTCCTCACCACGGCCGCAGTGCAGCTGGAGCTCCTCAGCCCCTTCCAGCTCTACTTCAACCCGCACCT
GGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCATCACCACCTTCCTCTTCTTCGGGCCCCTGGGATTCGGC
TTCTTTTTCAACATGCTCTTCGTGTTCCGCTACTGCCGCATGCTGGAGGAGGGTTCTTTCCGTGGCCGCA
AGGCTGACTTCGTTTTCATGTTTCTCTTCGGTGGTGTTCTTATGACTCTGCTGGGATTCCTGGGCAGCCT
GTTTTTCCTGGGACAGGCCCTCATGGCCATGCTGGTCTATGTATGGAGCCGTCGCAGCCCTCACGTGAGG
GTCAACTTCTTCGGCTTACTCAACTTCCAGGCACCATTCCTGCCCTGGGCCCTCATGGGCTTCTCGCTGC
TGCTGGGCAACTCGGTTGTCACAGACCTGTTAGGGATCCTTGTGGGCCACATCTACTACTTCCTAGAAGA
CGTCTTTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGACCCCCAGCGTGTTGAAGCTGCTACTAGAT
GACCCTCAGGAAGACCCCGATTACCTGCCCCTTCCCGAAGAGCAGCCAGAGCTCTAA

Translation (228 aa):
MAGQRLAAGFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITTFLFFGPLGFG
FFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSLFFLGQALMAMLVYVWSRRSPHVR
VNFFGLLNFQAPFLPWALMGFSLLLGNSVVTDLLGILVGHIYYFLEDVFPNQPGGKRLLLTPSVLKLLLD
DPQEDPDYLPLPEEQPEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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