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Report for CCDS24261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24261.1 Public Mus musculus 10 Rbms2 23 108 98 CCDS HistoryNCBI Gene:56516Re-query CCDS DB by CCDS ID:24261.1Re-query CCDS DB by GeneID:56516See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24261.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092033.3 ENSMUSP00000089664.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092033.3Link to Ensembl Protein Viewer:ENSMUSP00000089664.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000092033Re-query CCDS DB by Protein ID:ENSMUSP00000089664
Original member NCBI NM_019711.2 NP_062685.2 Updated not alive Link to Nucleotide Sequence:NM_019711.2Link to Protein Sequence:NP_062685.2Re-query CCDS DB by Nucleotide ID:NM_019711Re-query CCDS DB by Protein ID:NP_062685
Current member NCBI NM_019711.3 NP_062685.2 Accepted alive Link to Nucleotide Sequence:NM_019711.3Link to Protein Sequence:NP_062685.2Re-query CCDS DB by Nucleotide ID:NM_019711Re-query CCDS DB by Protein ID:NP_062685Link to BLAST:NP_062685.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062685.2 383 Q8VC70 383 100% 0 0

Chromosomal Locations for CCDS 24261.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128133645 128133725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128134128 128134208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128134997 128135107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128137474 128137567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128137661 128137707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128137920 128138029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128138118 128138197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128143395 128143552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128145673 128145764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128146602 128146660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128151183 128151355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128176350 128176415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1152 nt):
ATGCTGCTATCAGTGACTTCCAGGCCTGGGATTTCGACTTTTGGCTATAACAAGAACAACAAGAAGCTAT
ATGTGGCTCAGCAAATGGCACCTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCGGCGGAGGCGGCGG
CGGGAGTGGTGGGAACGACCAGCTGAGCAAAACCAACCTGTATATCCGAGGACTGCAGCCAGGCACCACT
GACCAGGACCTTGTCAAGCTCTGTCAGCCGTATGGCAAGATTGTCTCCACTAAGGCCATCCTGGACAAGA
CCACAAACAAGTGCAAAGGCTATGGCTTTGTGGACTTCGACAGTCCGTCATCAGCACAGAAAGCTGTAAC
TGCACTGAAAGCCAGTGGTGTGCAGGCACAAATGGCAAAGCAACAGGAGCAAGACCCTACAAACTTATAC
ATCTCAAACCTCCCTCTGTCAATGGACGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAGGTCA
TCTCTACTCGGATCCTTCGAGACACTAGTGGGGCCAGCAGAGGGGTCGGCTTTGCAAGGATGGAGTCAAC
AGAGAAGTGTGAAGCCATCATCACCCACTTTAATGGAAAGTATATAAAGACACCCCCTGGAGTAGCAGCA
CCTTCTGACCCTTTGCTTTGCAAATTTGCTGACGGTGGGCCAAAGAAACGACAGAGCCAAGGAAGATACG
TGCAAAATGGACGGGCCTGGCCAAGGAACGGAGACATGGGCGGTATGGCCTTGACCTATGACCCCACTGC
TGCCCTTCAGAATGGGTTCTACGCAGCTCCTTACAGTATCGCCCACAGCAGGATGCTTGCTCAATCTGCG
CTAGCCCCGTATCTTCCATCTCCTGTGTCTTCCTATCAGGGCTCAGTTCTGACACCAGGGATGGACCACC
CCCTCTCTCTCCAGCCTGCCTCCATGATGGGACCTCTTACCCAGCAACTGGGTCACCTGTCACTCAACAG
TCTGGGCACGTTCATGCCGGCAGCTGCTGCTATGCATGGGGCTTACATCTCCCAGTACCCAGCTGTGCCT
TCTTCCAGTGTTTCTGCTGAGGAGAGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCCCCCCTCAGACC
ACGGGGTCTATCCTTTCCAGTTCAGCAAATAA

Translation (383 aa):
MLLSVTSRPGISTFGYNKNNKKLYVAQQMAPPSPRNSTPNSSGGGGGGSGGNDQLSKTNLYIRGLQPGTT
DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTALKASGVQAQMAKQQEQDPTNLY
ISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAA
PSDPLLCKFADGGPKKRQSQGRYVQNGRAWPRNGDMGGMALTYDPTAALQNGFYAAPYSIAHSRMLAQSA
LAPYLPSPVSSYQGSVLTPGMDHPLSLQPASMMGPLTQQLGHLSLNSLGTFMPAAAAMHGAYISQYPAVP
SSSVSAEESNGQQNQLAVEPPSDHGVYPFQFSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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