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Report for CCDS24294.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24294.1 Public Mus musculus 10 Dnajc14 23 108 98 CCDS HistoryNCBI Gene:74330Re-query CCDS DB by CCDS ID:24294.1Re-query CCDS DB by GeneID:74330See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24294.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026410.1 ENSMUSP00000026410.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026410.1Link to Ensembl Protein Viewer:ENSMUSP00000026410.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000026410Re-query CCDS DB by Protein ID:ENSMUSP00000026410
Original member Current member EBI ENSMUST00000219508.1 ENSMUSP00000151343.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000219508.1Link to Ensembl Protein Viewer:ENSMUSP00000151343.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000219508Re-query CCDS DB by Protein ID:ENSMUSP00000151343
Original member Current member EBI ENSMUST00000217745.1 ENSMUSP00000151530.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217745.1Link to Ensembl Protein Viewer:ENSMUSP00000151530.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217745Re-query CCDS DB by Protein ID:ENSMUSP00000151530
Original member Current member NCBI NM_001359824.1 NP_001346753.1 Accepted alive Link to Nucleotide Sequence:NM_001359824.1Link to Protein Sequence:NP_001346753.1Re-query CCDS DB by Nucleotide ID:NM_001359824Re-query CCDS DB by Protein ID:NP_001346753Link to BLAST:NP_001346753.1
Original member Current member NCBI NM_001359825.1 NP_001346754.1 Accepted alive Link to Nucleotide Sequence:NM_001359825.1Link to Protein Sequence:NP_001346754.1Re-query CCDS DB by Nucleotide ID:NM_001359825Re-query CCDS DB by Protein ID:NP_001346754Link to BLAST:NP_001346754.1
Original member Current member NCBI NM_028873.5 NP_083149.3 Accepted alive Link to Nucleotide Sequence:NM_028873.5Link to Protein Sequence:NP_083149.3Re-query CCDS DB by Nucleotide ID:NM_028873Re-query CCDS DB by Protein ID:NP_083149Link to BLAST:NP_083149.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001346753.1 703 Q921R4 703 100% 0 0
NP_001346754.1 703 Q921R4 703 100% 0 0
NP_083149.3 703 Q921R4 703 100% 0 0

Chromosomal Locations for CCDS 24294.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128806211 128807620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128814038 128814144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128814566 128814685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128816712 128816872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128816958 128817060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128817201 128817411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2112 nt):
ATGGCCCAGAAGCACCCGGGAGAAAGAAGGTTGTGTGGAGCCCACCGCAGTGGTGGTACCTCCCTCAGTA
CATCAGGATCCTCTGTGGACCCCGAAATACTTTCATTCTCAGGACTCAGGGACTCAGCAGAGACTGCTCC
TAATGGTACACGATGCCTCAAAGAGCACTCCGGCCCTAAGTACACACAGCCTCCAAATCCAGCCCACTGG
TCAGATCCAAGCCATGGTCCTCCAAGGGGTCCAGGACCACCTAGAGGAGGAGGCTACCCTGATGAGAGCG
AGACAGGTTCAGAAGAGTCAGGAGTGGACCAGGAACTCTCAAGAGAGAATGAGACTGGGTACCAGGAGGA
TGGGAGTCCTTCTTTTCTTTCCATTCCATCTGCTTGTAACTGCCAGGGAAGCCCTGGAGTCCCCGAAGGA
ACTTACTCCGAGGAAGGAGATGGCTCTTCTAGCAGCCTTTGCCACCATTGCACCTCTCCAGCCTTGGGGG
AAGATGAAGAGTTGGAAGAAGAATATGATGATGAGGAACCTCTTAAATTTCCCAGTGATTTTTCACGTGT
GTCCAGTGGAAAGAAACCCTTGTCCCGGAGGCAGAAGCACCGTTTTCTGATCAAGGAGGATGTTCGGGAT
AGTGGACGCAGAGAACCCAAGGCCCCAGGTCGTCATCGGCTGGCCCGAAAAAGAAGTCAGACAGATAAGC
GCAGAGGCCTGGGACTGTGGGGAGTAGAGGAACTATGTCAGCTTGGACAAGCAGGCTTCTGGTGGCTGAT
TGAACTTCTGGTATTGGTGGGAGAGTATGTGGAAACCTGTGGCCATCTCATTTACGCATGCAGGAAGCTG
AAAGGCAGTGACCTGGACCTTTTTCGAGTCTGGGTGGGGGTCTGGGCCAGGAGACTGGGGGGCTGGGCCC
GCATGATGTTCCAGTTTCTAAGCCAGAGCTTCTTCTGTGTGGTGGGGCTGCTCATCCGTATTCTTAGGGT
AGTGGGTGCTTTCCTACTCCTGGCTCTCGCCCTCTTTTTGGGATGTCTACAATTGGGCTGGAGGTTTTCG
GTGGGACTGGGCAACCGGTTAGGCTGGAGGGATAAGACCGCTTGGCTGTTCTCTTGGCTGGGTTCTCCAG
CCTTGCATCATTGCTTGACTCTGCTGAAAGATAGCAGGCCATGGCAGCAGCTGGTAAGGTTAATACAGTG
GGGCTGGCAGGAGCTGCCCTGGGTCAAACAGAGGACTAAGAAACAGGGCAATGCACCTGTAGCTAGCGGG
CGATACTGCCAGCCTGAAGAGGAAGTGACCCGACTCTTGACCATGGCTGGGGTTCCTGAAGATGAACTAA
ACCCTTTTCATGTGCTGGGGGTTGAAGCTACAGCATCCGACACTGAACTAAAGAAGGCCTATAGGCAGCT
AGCAGTAATGGTCCATCCTGATAAAAATCACCATCCCCGGGCTGAGGAGGCCTTCAAAATTTTGCGGGCA
GCTTGGGACATTGTCAGCAACCCAGAGAGGCGGAAGGAATATGAGATGAAACGGATGGCAGAGAATGAGC
TCAGCCGGTCAGTGAATGAGTTTCTGTCGAAACTACAAGATGACCTCAAGGAGGCAATGAACACGATGAT
GTGCAGCAGATGCCAAGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCCAAGAGTGCCAGATACTGT
GCTGAGTGTAACAGGCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCGAGCATGCTGGGCCTCA
AGATCACTTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAGAGTGGGCTGGATGCCAGCGTGT
GGGTATCTCCCCAGATACTCACAGAGTTCCTTACCACATCTCATTTGGTTCTCGGGTACCCGGCACCAGT
GGCCGGCAGAGGGCCACTCCAGAGTCCCCTCCTGCTGACCTGCAGGATTTCTTGAGCCGGATCTTTCAAG
TACCTCCGGGGCCGATGTCCAATGGGAACTTCTTTGCCGCACCTCACCCTGGCCCTGGGACCACTTCGAC
CTCTAGGCCCAACAGTTCAGTACCCAAGGGAGAAGCCAAACCTAAACGGCGGAAGAAAGTGAGGCGGCCC
TTTCAACGATGA

Translation (703 aa):
MAQKHPGERRLCGAHRSGGTSLSTSGSSVDPEILSFSGLRDSAETAPNGTRCLKEHSGPKYTQPPNPAHW
SDPSHGPPRGPGPPRGGGYPDESETGSEESGVDQELSRENETGYQEDGSPSFLSIPSACNCQGSPGVPEG
TYSEEGDGSSSSLCHHCTSPALGEDEELEEEYDDEEPLKFPSDFSRVSSGKKPLSRRQKHRFLIKEDVRD
SGRREPKAPGRHRLARKRSQTDKRRGLGLWGVEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRKL
KGSDLDLFRVWVGVWARRLGGWARMMFQFLSQSFFCVVGLLIRILRVVGAFLLLALALFLGCLQLGWRFS
VGLGNRLGWRDKTAWLFSWLGSPALHHCLTLLKDSRPWQQLVRLIQWGWQELPWVKQRTKKQGNAPVASG
RYCQPEEEVTRLLTMAGVPEDELNPFHVLGVEATASDTELKKAYRQLAVMVHPDKNHHPRAEEAFKILRA
AWDIVSNPERRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKSARYC
AECNRLHPAEEGDFWAESSMLGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRVPGTS
GRQRATPESPPADLQDFLSRIFQVPPGPMSNGNFFAAPHPGPGTTSTSRPNSSVPKGEAKPKRRKKVRRP
FQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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