NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS24774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24774.1 Public Mus musculus 11 Mprip 23 108 98 CCDS HistoryNCBI Gene:26936Re-query CCDS DB by CCDS ID:24774.1Re-query CCDS DB by GeneID:26936See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072031.12 ENSMUSP00000071914.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072031.12Link to Ensembl Protein Viewer:ENSMUSP00000071914.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000072031Re-query CCDS DB by Protein ID:ENSMUSP00000071914
Original member Current member NCBI NM_201245.3 NP_957697.1 Accepted alive Link to Nucleotide Sequence:NM_201245.3Link to Protein Sequence:NP_957697.1Re-query CCDS DB by Nucleotide ID:NM_201245Re-query CCDS DB by Protein ID:NP_957697Link to BLAST:NP_957697.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_957697.1 1037 P97434-2 1037 100% 0 0

Chromosomal Locations for CCDS 24774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59662826 59662948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59696126 59696203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59696958 59697023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59727552 59727703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59731508 59731592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59735830 59736064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59737072 59737228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59741120 59741261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59741991 59742098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59743771 59743827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59744752 59744820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59748547 59748636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59749519 59749628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59752490 59753060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59754993 59755109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59764380 59764527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59765408 59765525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59766728 59766887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59767955 59768074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59769213 59769299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59769884 59770046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59771617 59771702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59775516 59775587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3114 nt):
ATGTCGGCGGCCAAGGAAAACCCGTGCAGGAAATTTCAGGCCAACATCTTCAACAAGAGCAAGTGTCAGA
ACTGCTTCAAGCCCCGCGAGTCGCATCTGCTCAACGACGAGGACCTGACGCAGGCAAAACCCATTTATGG
TGGCTGGCTGCTCCTGGCTCCAGATGGCACTGACTTTGACAACCCAGTGCACCGGTCACGGAAATGGCAG
CGACGATTCTTCATCCTTTATGAGCATGGCCTCTTGCGATATGCCCTGGATGAGATGCCCACCACCCTCC
CTCAGGGCACCATCAACATGAACCAGTGCACAGATGTGGTGGATGGGGAGGCCCGCACAGGGCAGAAGTT
CTCCCTCTGCATCCTGACACCTGACAAGGAACATTTTATCAGGGCAGAAACCAAGGAGATCATCAGTGGG
TGGTTAGAGATGCTCATGGTGTATCCTCGAACCAACAAGCAGAACCAGAAGAAGAAACGGAAAGTAGAGC
CACCTACCCCACAGGAGCCTGGGCCTGCTAAGATGGCTGTCACTAGCAGTAGTGGCGGCAGCAGTGGTAG
CAGCAGCAGCATTCCCAGTGCTGAGAAAGTTCCCACCACCAAATCCACACTCTGGCAGGAAGAAATGAGA
GCCAAAGACCAACCTGATGGGACCAGCCTGAGTCCAGCTCAAAGTCCCAGCCAAAGCCAGCCTCCTGCTG
CTTGCACCCCACGGGAACCAGGACTAGAAAGCAAAGAAGATGAAAGCACCATAAGTGGGGACCGTGTGGA
TGGTGGTCGGAAAGTACGGGTAGAGAGCGGCTACTTCTCCCTGGAGAAGGCCAAGCAGGACCTGAGGGCT
GAGGAGCAGCTGCCCCCACTACTCTCCCCACCCAGCCCCAGCACCCCACACAGCAGGAGGTCCCAGGTAA
TTGAGAAATTTGAGGCCTTGGACATTGAAAAAGCAGAGCACATGGAAACCAACATGCTGATTCTGACCAC
TCCATCAAGTGACACTCGTCAGGGCCGCAGTGAGAGACGGGCCATCCCTAGAAAGCGGGACTTTGCCAGC
GAAGCCCCCACAGCTCCTCTCTCAGATGCTTGTCCCCTGTCTCCACACCGAAGAGCCAAGTCATTGGACA
GGAGGTCCACAGAATCCTCCATGACGCCTGACCTGCTGAATTTCAAGAAAGGCTGGCTAACCAAGCAGTA
TGAGGATGGCCAGTGGAAGAAACACTGGTTTGTCCTGGCAGATCAGAGCCTGAGATACTACAGGGATTCC
GTGGCTGAGGAGGCAGCTGACCTAGATGGAGAAATTAACTTGTCCACTTGCTATGATGTCACTGAGTATC
CAGTCCAGAGAAACTATGGCTTTCAGATACATACCAAGGAGGGTGAGTTCACCCTCTCAGCCATGACATC
TGGCATACGACGGAACTGGATCCAGACCATTATGAAACATGTGCTCCCAGCATCTGCCCCAGATGTGACC
AGCTCATTGCCTGAGGGAAAGAATAAAAGCACATCTTTTGAGACCTGCTCAAGGTCAACTGAGAAGCAAG
AAGCTGAGCCAGGAGAGCCAGATCCTGAACAAAAGAAGAGCCGTGCTCGAGAGCGGAGGCGGGAGGGTCG
CTCCAAGACCTTTGACTGGGCTGAATTCCGCCCTATACAACAGGCCCTGGCTCAAGAAAGGGCCAGCGCT
GTTGGGTCTTCTGATTCTGGTGACCCTGGGTGTCTTGAAGCCGAGCCAGGTGAGCTGGAGCGTGAACGAG
CTCGACGTCGAGAAGAACGCCGCAAGCGCTTTGGGATGCTGGACACCATTGATGGACCAGGAATGGAGGA
CACAGCCCTACGTATGGACATCGACCGGAGCCCAGGGCTGCTGGGAACCCCTGACCTCAAGACACAGAAT
GTCCACGTGGAAATTGAGCAGCGTTGGCATCAAGTGGAGACCACCCCTCTCAGGGAGGAGAAACAGGTGC
CCATTGCCCCTCTGCACCTATCCTTGGAGGACAGAAGTGAGCGGCTCTCCACACATGAGCTCACCTCTCT
GCTAGAGAAGGAGCTGGAGCAGAGCCAGAAAGAAGCCTCGGATCTTCTAGAGCAGAACCGGCTTCTACAG
GACCAGTTAAGGGTGGCCCTGGGCAGAGAACAGAGTGCCCGGGAGGGCTATGTGCTGCAGGCTACATGTG
AGCGAGGCTTTGCCGCCATGGAGGAGACACATCAGAAGAAGATTGAAGACCTACAGAGGCAACACCAGCG
GGAGCTAGAGAAGCTGCGGGAGGAAAAAGACCGCCTCCTGGCTGAGGAGACAGCTGCCACCATATCAGCC
ATTGAAGCCATGAAGAATGCTCACCGAGAGGAGATGGAACGAGAGTTAGAGAAGAGCCAGCGGTCTCAGA
TCAGCAGCATCAATTCAGACATAGAAGCCCTGAGGCGACAGTACCTGGAGGAGCTGCAGTCAGTGCAGCG
GGAGCTGGAAGTCCTTTCAGAGCAGTACTCCCAAAAGTGCCTGGAGAATGCACACCTAGCCCAGGCGCTG
GAGGCCGAGCGTCAGGCCCTGCGGCAATGCCAGCGTGAGAACCAGGAGCTCAACGCCCACAACCAGGAGC
TGAATAACCGCCTGGCTGCGGAGATCACACGGTTGCGGACACTACTGACTGGAGACGGTGGTGGGGAGTC
CACTGGGTTGCCTCTCACACAGGGCAAGGATGCCTATGAGTTAGAGGTCTTGTTGCGGGTCAAAGAGTCA
GAAATCCAGTACCTGAAACAGGAGATCAGCTCCCTCAAGGATGAACTCCAGACAGCCCTGCGGGATAAGA
AGTATGCTAGTGACAAGTACAAAGACATCTACACTGAGCTCAGCATTGCCAAGGCCAAGGCTGACTGCGA
CATCAGCAGGCTGAAGGAGCAGCTGAAAGCAGCCACAGAGGCACTGGGCGAGAAATCTCCTGAAGGCACT
ACTGTGTCAGGATATGACATAATGAAATCTAAAAGCAATCCTGACTTCCTGAAGAAAGACAGATCCTGTG
TTACCCGGCAACTCAGAAACATCAGGTCCAAGAGTCTGAAGGAAGGCCTGACGGTGCAGGAGCGCTTGAA
GCTCTTTGAATCCAGGGACTTGAAGAAAGATTAG

Translation (1037 aa):
MSAAKENPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLTQAKPIYGGWLLLAPDGTDFDNPVHRSRKWQ
RRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGEARTGQKFSLCILTPDKEHFIRAETKEIISG
WLEMLMVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSSGGSSGSSSSIPSAEKVPTTKSTLWQEEMR
AKDQPDGTSLSPAQSPSQSQPPAACTPREPGLESKEDESTISGDRVDGGRKVRVESGYFSLEKAKQDLRA
EEQLPPLLSPPSPSTPHSRRSQVIEKFEALDIEKAEHMETNMLILTTPSSDTRQGRSERRAIPRKRDFAS
EAPTAPLSDACPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLADQSLRYYRDS
VAEEAADLDGEINLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVLPASAPDVT
SSLPEGKNKSTSFETCSRSTEKQEAEPGEPDPEQKKSRARERRREGRSKTFDWAEFRPIQQALAQERASA
VGSSDSGDPGCLEAEPGELERERARRREERRKRFGMLDTIDGPGMEDTALRMDIDRSPGLLGTPDLKTQN
VHVEIEQRWHQVETTPLREEKQVPIAPLHLSLEDRSERLSTHELTSLLEKELEQSQKEASDLLEQNRLLQ
DQLRVALGREQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATISA
IEAMKNAHREEMERELEKSQRSQISSINSDIEALRRQYLEELQSVQRELEVLSEQYSQKCLENAHLAQAL
EAERQALRQCQRENQELNAHNQELNNRLAAEITRLRTLLTGDGGGESTGLPLTQGKDAYELEVLLRVKES
EIQYLKQEISSLKDELQTALRDKKYASDKYKDIYTELSIAKAKADCDISRLKEQLKAATEALGEKSPEGT
TVSGYDIMKSKSNPDFLKKDRSCVTRQLRNIRSKSLKEGLTVQERLKLFESRDLKKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH