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Report for CCDS24963.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24963.1 Public Mus musculus 11 Camta2 23 108 98 CCDS HistoryNCBI Gene:216874Re-query CCDS DB by CCDS ID:24963.1Re-query CCDS DB by GeneID:216874See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24963.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036299.13 ENSMUSP00000043792.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036299.13Link to Ensembl Protein Viewer:ENSMUSP00000043792.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000036299Re-query CCDS DB by Protein ID:ENSMUSP00000043792
Original member Current member NCBI NM_178116.4 NP_835217.1 Accepted alive Link to Nucleotide Sequence:NM_178116.4Link to Protein Sequence:NP_835217.1Re-query CCDS DB by Nucleotide ID:NM_178116Re-query CCDS DB by Protein ID:NP_835217Link to BLAST:NP_835217.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835217.1 1208 Q80Y50-1 1208 100% 0 0

Chromosomal Locations for CCDS 24963.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 70670199 70670262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70670346 70670420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70670549 70670736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70670891 70670911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70671008 70671079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70671450 70671633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70671884 70672080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70673954 70674255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70674612 70674834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70675156 70675234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70675553 70675737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70676400 70676515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70678284 70678418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70679527 70679653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70680825 70681768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70682461 70682595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70682894 70683047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70683279 70683365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70683890 70684025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70684105 70684172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70686063 70686166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70686347 70686377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3627 nt):
ATGAATACCAAGGACACCACTGAGGTTGCTGAGAATAGCCACCACCTGAAGATCTTCCTCCCCAAGAAAT
TGCTGGAGTGTCTTCCTCGATGCCCACTGTTGCCTCCAGAGCGGCTCCGATGGAATACAAATGAGGAGAT
TGCATCCTACCTGATCACCTTTGAGAAACACGATGAGTGGCTGTCTTGTGCCCCAAAGACAAGGCCTCAG
AATGGCTCCATTATCCTCTACAATCGTAAGAAGGTGAAATACCGGAAGGATGGTTACCTTTGGAAGAAAC
GGAAGGATGGGAAGACTACCCGAGAGGACCACATGAAACTCAAGGTCCAGGGCATGGAGCCTGTCTCCTG
GCAGTGTCTCTATGGCTGCTACGTTCACTCTTCCATCGTCCCCACATTCCACCGGCGCTGCTATTGGCTG
CTCCAGAACCCCGACATCGTCCTTGTGCACTACCTGAACGTCCCAGCCCTGGAGGATTGTGGAAAGGGCT
GTAGCCCCATCTTTTGTTCCATCAGTAGCGACCGTCGAGAATGGCTGAAGTGGTCACGTGAGGAGCTCTT
GGGACAGCTGAAGCCCATGTTTCATGGCATCAAGTGGAGCTGTGGGAATGGGGCAGAGGAATTCTCCGTG
GAACAGTTGGTGCAACAGATCTTGGACACCCACCCAACCAAGCCAGCACCCAGAACTCATGCTTGTCTCT
GCAGTGGGGGCCTTGGTTCCGGGAGCCTTACCCACAAATGCAGTAGCACGAAACACCGCATCATCTCTCC
CAAAGTGGAGCCCCGAGCTTTAGCCCTGGCTTCTATATCCCACTCCAAGCCCCCCGAACCCCCACCACTG
ATAGCTCCACTTCCTCCAGAGCTCCCCAAGGCACACACCTCCCCATCTTCCTCCTCTTCTTCCTCCTCCT
CCTCAGGATTTGCAGAACCCCTAGAAATCAGGCCTAGCCCTCCTACCTCTCGAGGGGGTTCATCAAGAGG
AGGCACTGCTATCCTCCTCCTAACAGGACTAGAGCAGCGCGCTGGGGGCCTGACACCCACCAGGCACTTG
GCTCCGCAGGCTGAGCCTAGACCTCCTGTGAGCTTGGCCGTGGTTGTAGGTTCTGAGCCTTCTGCCCCAC
CGGCTCCTCCCAGCCCTGCCTTTGACCCTGATCGTTTTCTCAACAGCCCCCAAAGGGGCCAGACATACGG
AGGGGGCCAAGGAGTAAACCCAGACTTCCCCGAGGCAGAGGGCACTCACACTCCCTGTCCTGCCCTGGAA
CCTGCAGCTGCCCTGGAGCCCCAGGCGGCTGCTCGAGGTCTCGCTCCACAGTTGGGAGCAAACGGGAGAA
GAGGAAACAAATTCTTTATCCAAGATGATGATAGTGGGGAGGAACTCAAGGGTCCGGGAACGGTGCCGCC
GGTACCTTCATCCCCTCCTTCATCCCCGTCCTCCCCAACCGCCTTGCCGCCATCAGGCAGGGCAACGAGA
GGAGAAGCCTTGTTCGGAGGCTCTGCTGGCAGCAGCAGCGAGCTCGAGCCCTTCAGTCTTTCGTCATTCC
CAGACCTCATGGGAGAACTCATCAGTGATGAAGCTCCAGGTGTCCCTGCCCCCGCCCCCCAGCTCTCTCC
TGCGCTAAATGCCATCACAGACTTCTCCCCAGAGTGGTCCTACCCAGAGGGCGGGGTCAAGGTGCTCATC
ACAGGCCCTTGGACAGAGGCCGCAGAGCATTACTCCTGTGTCTTCGATCACATCGCAGTGCCAGCCTCCC
TGGTCCAGCCTGGTGTCTTACGCTGCTACTGTCCTGCCCATGAGGTAGGGCTGGTGTCTTTGCAGGTGGC
GGGGCGAGAGGGCCCCCTCTCTGCCTCTGTGCTCTTTGAGTATCGAGCCCGCCGGTTCCTGTCTCTGCCT
AGTACACAGCTCGACTGGTTGTCACTGGATGACAGCCAGTTCCGGATGTCCATCCTGGAGCGGCTGGAGC
AGATGGAGAAGCGGATGGCAGAGATTGCGGCAGCTGGGCAGGCTCCTGGTCAGGGCCCAGAGGCTCCTCC
AATTCAGGATGAAGGCCAGGGCCCTGGCTTCGAGGCACGGGTGGTGGTCTTGGTAGAGAGCATGATCCCG
CGGTCCACTTGGAGGGGTCCTGAACGGCTGATCCATGGAAGTCCCTTCCGGGGCATGAGCCTCCTACATC
TGGCTGCTGCACAGGGCTACGCTCGGCTCATCGAGACTCTGAGCCAGTGGAGGAGTGTGGAAACAGGAAG
CTTGGACTTAGAGCAAGAGGTTGACCCGCTCAATGTGGACCATTTCTCTTGCACCCCTCTGATGTGGGCC
TGTGCTCTGGGACACTTAGAAGCTGCTGTGCTTCTTTTCTGTTGGAACCGACAAGCACTGAGCATTCCGG
ACTCTCTGGGCCGACTCCCCCTGTCTGTGGCTCATTCTCGTGGTCACGTGCGCCTTGCCCGCTGCCTTGA
GGAACTGCAGAGACAGGAGCTTTCAGTTGAGCACCCACTCGCTCTATCCCCACCATCCTCTAGCCCAGAC
ACTGGCCTGAGCAGCGCCTCGTCACCCTCCGAGCTGTCAGATGGCACTTTCTCTGTGACATCAGCCTACT
CAAGTGCCCCAGATGGCAGTCCTCCCCCTGCTCCTCCGCTGGCCTCTGACATTTCTATGGAGATGATCCC
AGGCCAGCTTTCTTGTGGTGCCCCTGAGACACCCTTACTCCTCATGGACTATGAAGCCACTAACTCCAAA
GAACCTGCTCCCTCCCCGTGCGGCCCCCCACTAGCCCAGGACAATGGGGCTGCTCCAGAGGATGCTGACA
GCCCACCAGCTGTGGATGTGATCCCGGTGGACATGATCTCACTGGCCAAGCAGATCATCGACGCCACACC
AGAGCGGATTAAACGAGAGGACTTCTCAGAGTTCCCTGACGCTGGAGCCTCACCACGGGAGCACACAGGC
ACCGTGGGGCTCAGTGAGACCATGTCCTGGCTGGCCAGTTACCTGGAGAATGTGGATCATTTCCCCAGCT
CAGCTCCTCCCAGTGAGCTGCCCTTTGAACGAGGTCGCCTCGCTATCCCCCCTGCACCTTCCTGGGCAGA
GTTCCTCTCTGCATCTACCAGTGGCAAGATGGAAAGTGATTTTGCCCTGCTGACTCTCTCAGATCACGAG
CAGCGGGAGCTGTATGAGGCAGCACGAGTCATCCAGACAGCTTTCCGAAAGTACAAGGGTCGGAGGCTGA
AGGAGCAGCAGGAGGTAGCCGCAGCGGTGATCCAACGTTGTTATCGGAAGTACAAGCAGCTGACCTGGAT
TGCACTTAAGTTTGCACTCTATAAGAAAATGACTCAGGCGGCCATCCTGATTCAGAGCAAGTTCCGAAGC
TACTATGAACAGAAGCGGTTTCAGCAGAGCCGCCGAGCAGCGGTGCTTATCCAGCAGCACTACCGCTCCT
ACCGCCGCAGGCCGGGGCCTCCTCACCGGCCCTCAGGCCCCCTTCCTGCTCGAAACAAGGGCACCTTTCT
CACCAAGAAGCAAGACCAGGCAGCCCGGAAAATAATGAGGTTCCTGCGGCGCTGCCGACACAGAATGAGG
GAACTGAAGCAGAACCAGGAGCTGGAGGGGCTGCCCCAGCCAGGACTGGCCACCTGA

Translation (1208 aa):
MNTKDTTEVAENSHHLKIFLPKKLLECLPRCPLLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQ
NGSIILYNRKKVKYRKDGYLWKKRKDGKTTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVPTFHRRCYWL
LQNPDIVLVHYLNVPALEDCGKGCSPIFCSISSDRREWLKWSREELLGQLKPMFHGIKWSCGNGAEEFSV
EQLVQQILDTHPTKPAPRTHACLCSGGLGSGSLTHKCSSTKHRIISPKVEPRALALASISHSKPPEPPPL
IAPLPPELPKAHTSPSSSSSSSSSSGFAEPLEIRPSPPTSRGGSSRGGTAILLLTGLEQRAGGLTPTRHL
APQAEPRPPVSLAVVVGSEPSAPPAPPSPAFDPDRFLNSPQRGQTYGGGQGVNPDFPEAEGTHTPCPALE
PAAALEPQAAARGLAPQLGANGRRGNKFFIQDDDSGEELKGPGTVPPVPSSPPSSPSSPTALPPSGRATR
GEALFGGSAGSSSELEPFSLSSFPDLMGELISDEAPGVPAPAPQLSPALNAITDFSPEWSYPEGGVKVLI
TGPWTEAAEHYSCVFDHIAVPASLVQPGVLRCYCPAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLP
STQLDWLSLDDSQFRMSILERLEQMEKRMAEIAAAGQAPGQGPEAPPIQDEGQGPGFEARVVVLVESMIP
RSTWRGPERLIHGSPFRGMSLLHLAAAQGYARLIETLSQWRSVETGSLDLEQEVDPLNVDHFSCTPLMWA
CALGHLEAAVLLFCWNRQALSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQELSVEHPLALSPPSSSPD
TGLSSASSPSELSDGTFSVTSAYSSAPDGSPPPAPPLASDISMEMIPGQLSCGAPETPLLLMDYEATNSK
EPAPSPCGPPLAQDNGAAPEDADSPPAVDVIPVDMISLAKQIIDATPERIKREDFSEFPDAGASPREHTG
TVGLSETMSWLASYLENVDHFPSSAPPSELPFERGRLAIPPAPSWAEFLSASTSGKMESDFALLTLSDHE
QRELYEAARVIQTAFRKYKGRRLKEQQEVAAAVIQRCYRKYKQLTWIALKFALYKKMTQAAILIQSKFRS
YYEQKRFQQSRRAAVLIQQHYRSYRRRPGPPHRPSGPLPARNKGTFLTKKQDQAARKIMRFLRRCRHRMR
ELKQNQELEGLPQPGLAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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