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Report for CCDS2501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2501.1 Public Homo sapiens 2 NEU2 24 110 108 CCDS HistoryNCBI Gene:4759Re-query CCDS DB by CCDS ID:2501.1Re-query CCDS DB by GeneID:4759See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2501.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000233840.3 ENSP00000233840.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000233840.3Link to Ensembl Protein Viewer:ENSP00000233840.3Re-query CCDS DB by Nucleotide ID:ENST00000233840Re-query CCDS DB by Protein ID:ENSP00000233840
Original member Current member NCBI NM_005383.2 NP_005374.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005383.2Link to Protein Sequence:NP_005374.2Re-query CCDS DB by Nucleotide ID:NM_005383Re-query CCDS DB by Protein ID:NP_005374Link to BLAST:NP_005374.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005374.2 380 Q9Y3R4 380 100% 0 0

Chromosomal Locations for CCDS 2501.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 233032672 233032872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 233034116 233035057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGGCGTCCCTTCCTGTCCTGCAGAAGGAGAGCGTGTTCCAGTCGGGAGCCCATGCCTACAGAATCCCTG
CCCTGCTCTACCTGCCTGGGCAGCAGTCCCTGCTGGCCTTCGCGGAACAGCGGGCAAGCAAGAAGGATGA
GCACGCAGAGCTGATTGTCCTGCGCAGAGGAGACTACGACGCACCCACCCACCAGGTTCAGTGGCAAGCT
CAGGAGGTGGTGGCCCAGGCCCGGCTGGATGGCCACCGGTCCATGAACCCATGCCCCTTGTATGACGCGC
AGACGGGGACCCTCTTCCTCTTCTTCATTGCCATCCCTGGGCAAGTCACGGAGCAACAGCAGCTGCAGAC
CAGGGCCAATGTGACGCGGCTGTGCCAAGTCACCAGCACTGACCACGGGAGGACCTGGAGCTCCCCCAGA
GACCTCACTGATGCGGCCATCGGCCCAGCCTACCGGGAGTGGTCCACCTTTGCAGTGGGCCCGGGGCATT
GTTTGCAGCTTCACGACAGGGCCCGGAGCCTGGTGGTGCCCGCCTACGCCTACCGGAAACTTCACCCCAT
CCAAAGGCCGATCCCCTCTGCCTTCTGCTTCCTCAGCCATGACCATGGGCGCACGTGGGCGCGAGGGCAC
TTTGTGGCCCAGGACACCCTGGAGTGCCAGGTGGCCGAAGTCGAGACTGGGGAGCAGAGGGTGGTGACCC
TCAACGCGAGAAGCCACCTCCGAGCCAGGGTCCAGGCCCAGAGCACCAATGACGGGCTTGATTTCCAGGA
GTCTCAGCTGGTGAAGAAGCTGGTGGAGCCGCCGCCCCAGGGCTGCCAGGGGAGCGTCATCAGCTTCCCC
AGCCCCCGCTCGGGGCCTGGCTCCCCAGCCCAGTGGCTGCTCTACACTCACCCCACACACTCCTGGCAGA
GGGCCGACCTGGGTGCCTACCTCAACCCGCGACCTCCAGCCCCTGAGGCCTGGTCAGAGCCGGTACTGCT
GGCCAAGGGCAGCTGTGCCTACTCAGACCTCCAGAGCATGGGCACCGGCCCTGATGGGTCCCCCTTGTTT
GGGTGTCTGTACGAAGCCAATGATTACGAGGAGATTGTCTTTCTCATGTTCACCCTGAAGCAAGCCTTCC
CAGCTGAGTACCTGCCTCAGTGA

Translation (380 aa):
MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQA
QEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPR
DLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGH
FVAQDTLECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFP
SPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLF
GCLYEANDYEEIVFLMFTLKQAFPAEYLPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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