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Report for CCDS25422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25422.1 Public Mus musculus 11 Fkbp10 23 108 98 CCDS HistoryNCBI Gene:14230Re-query CCDS DB by CCDS ID:25422.1Re-query CCDS DB by GeneID:14230See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25422.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001595.9 ENSMUSP00000001595.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001595.9Link to Ensembl Protein Viewer:ENSMUSP00000001595.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000001595Re-query CCDS DB by Protein ID:ENSMUSP00000001595
Original member Current member NCBI NM_010221.2 NP_034351.2 Accepted alive Link to Nucleotide Sequence:NM_010221.2Link to Protein Sequence:NP_034351.2Re-query CCDS DB by Nucleotide ID:NM_010221Re-query CCDS DB by Protein ID:NP_034351Link to BLAST:NP_034351.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034351.2 581 Q61576 581 100% 0 0

Chromosomal Locations for CCDS 25422.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 100415784 100416025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100420400 100420545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100420891 100421080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100421194 100421339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100421644 100421833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100421944 100422089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100422626 100422818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100423085 100423227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100423436 100423599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100423888 100424073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1746 nt):
ATGTTCCTTGTGGGGTCCTCCAGCCACACCCTCCATCGGCTCCGCATACTGCCGTTGCTGTTGCTTCTAC
AGACCTTGGAGAGGGGACTGGGCCGTGCCAGCCCGGCCGGAGCCCCCTTGGAAGATGTGGTCATCGAGAG
ATACCACATCCCTCGGGCCTGTCCCCGAGAAGTGCAGATGGGGGATTTTGTGCGTTACCACTACAATGGC
ACTTTCGAAGACGGGAAAAAGTTTGACTCCAGCTATGACCGTAGCACCCTGGTGGCCATCGTTGTGGGCG
TAGGCCGCCTCATCACCGGCATGGACCGGGGTCTCATGGGCATGTGTGTCAACGAGCGCCGCCGCCTCAT
TGTGCCTCCCCACCTGGGCTACGGCAGCATCGGTGTGGCGGGCCTCATCCCCCCTGATGCCACCCTCTAT
TTTGACGTGGTCCTGCTGGACGTGTGGAACAAAGCAGACACGGTGCAGTCAACTATCCTCCTGCGCCCTC
CCTACTGCCCCCGAATGGTGCAGAACAGTGACTTTGTGCGCTATCACTACAATGGCACTCTGCTGGATGG
CACTGCCTTTGACAACAGCTACAGTAGGGGAGGCACTTATGACACCTACATCGGCTCTGGTTGGCTGATC
AAAGGCATGGACCAGGGGCTGCTGGGCATGTGCCCTGGAGAGAAAAGGAAGATCATTATCCCTCCCTTCC
TGGCTTATGGGGAGAAAGGCTATGGGACTGTGATACCCCCGCAGGCCTCCCTGGTCTTCTATGTCCTGCT
GCTGGATGTCCACAACCCGAAGGACACGGTCCAGCTGGAGACGCTGGAGCTGCCCCAGGGCTGTGTCCGG
CGAGCTGTGGCGGGGGACTTCATGCGTTACCACTACAATGGCTCTTTGATGGATGGTACCCTCTTTGATT
CCAGCTACTCCCGAAACCACACCTACAATACCTATGTCGGGCAGGGTTACATCATCCCTGGGATGGACCA
GGGGCTGCAAGGCGCATGCATAGGGGAGCGAAGGAGGATTACTGTGCCCCCTCACCTTGCCTACGGGGAG
AATGGGACAGGAGACAAGATCCCTGGCTCGGCTGTGCTCATCTTCGATGTGCACGTCATCGACTTCCACA
ACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGCAATGAGACATCCAAAAT
CGGGGACTTCATTCGCTACCACTACAACTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGTCCCACGAC
TATGAGGCCCCTCAAGAGATCACCCTCGGAGCCAACAAAGTGATCGAAGGTCTGGACAGGGGCCTGCAGG
GCATGTGTGTAGGAGAGAGGAGGCAGCTCATTGTGCCCCCACACCTGGCCCACGGGGAGAATGGAGCCCG
GGGTGTCCCTGGCAGTGCTGTGCTGCTATTTGAGGTGGAGCTGGTATCCCGAGAGGATGGCCTGCCCACA
GGCTACCTGTTTGTGTGGTACCAGGATCCTTCCACTAGCCTTTTTGAAGACATGGATCTCAATAAAGATG
GAGAGGTGCCCCCAGAAGAGTTCTCTTCCTTCATCAAGGCTCAAGTGAATGAAGGCAAAGGACGCCTCAT
GCCTGGGCAAGACCCAGACAAAACCATCAGTGACATGTTTCAGAACCAGGACCGGAACCAGGATGGCAAG
ATCACAGCTGAGGAGCTCAAGCTGAAGTCAGATGAGGACCAGGAGCGGGTCCATGAGGAGCTCTGA

Translation (581 aa):
MFLVGSSSHTLHRLRILPLLLLLQTLERGLGRASPAGAPLEDVVIERYHIPRACPREVQMGDFVRYHYNG
TFEDGKKFDSSYDRSTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGVAGLIPPDATLY
FDVVLLDVWNKADTVQSTILLRPPYCPRMVQNSDFVRYHYNGTLLDGTAFDNSYSRGGTYDTYIGSGWLI
KGMDQGLLGMCPGEKRKIIIPPFLAYGEKGYGTVIPPQASLVFYVLLLDVHNPKDTVQLETLELPQGCVR
RAVAGDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYVGQGYIIPGMDQGLQGACIGERRRITVPPHLAYGE
NGTGDKIPGSAVLIFDVHVIDFHNPSDPVEIKTLSRPPENCNETSKIGDFIRYHYNCSLLDGTRLFSSHD
YEAPQEITLGANKVIEGLDRGLQGMCVGERRQLIVPPHLAHGENGARGVPGSAVLLFEVELVSREDGLPT
GYLFVWYQDPSTSLFEDMDLNKDGEVPPEEFSSFIKAQVNEGKGRLMPGQDPDKTISDMFQNQDRNQDGK
ITAEELKLKSDEDQERVHEEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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